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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
36
tissue
4
primary cell
3
cell line
Biosample term
4
astrocyte of the spinal cord
Organ
829
epithelium
309
kidney
291
connective tissue
172
vasculature
126
pancreas
114
blood vessel
100
skin of body
65
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
33
heart
29
artery
23
eye
23
intestine
22
embryo
20
lymphatic vessel
20
vein
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
cartilage tissue
Showing 4 of 4 results
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Download
FileSet
DSR081MBE
released
Annotation file set
: Candidate regulatory elements for BSS00092 astrocyte of the spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761GRM
released
Annotation file set
: Target gene predictions for BSS00092 astrocyte of the spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR755QZV
released
Annotation file set
: Chromatin states for BSS00092 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693SGT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE astrocyte of the spinal cord
Lab:
AMP-T2D consortium
Project:
AMP