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Annotation type
4
gene expression
Annotation Category
4
Gene expression levels
Annotation type Category
4
RNA-seq
Available data
4
bigWig
4
tsv
File set status
4
released
Genome assembly (visualization)
4
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
hepatocyte
4
endothelial cell of hepatic sinusoid
Organ
4
blood vessel
4
epithelium
4
liver
4
vasculature
Life stage
4
adult
Date released
4
February, 2024
Software used
2432
macs
2234
r
955
chromhmm
782
encode-ccres
237
abc
122
deseq2
117
deltasvm
98
qTLtools
31
cicero
25
nospecificsoft_customcode
25
seurat
23
chicago
18
samtools
14
hiccups
14
matrix-eQTL
12
deeptools
12
gtex_eqtl:V8
12
gtex_finemapping_eQTL:caveman
12
gtex_finemapping_eQTL:caviar
12
gtex_finemapping_eQTL:dapg
12
umitools
11
rasqual
10
limix
8
fastqtl
6
eigenmt
5
peer
5
unknown
4
salmon
3
mach2qtl
2
combined S2G strategy
2
emmax
2
minfi
2
mpraflow
2
sqtlseeker
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
bimbam
1
cisgenome
1
e-range
1
epacts
1
fast-lmm
1
haploview
1
pepatac
1
probabel
1
snap
1
spp
Lab
4
Ines Cebola, Imperial College London
Project
4
AMP
RFA
4
AMP2
biosample_term_name!
hepatocyte
naive thymus-derived CD4-positive, alpha-beta T cell
organ_slims!
brain
Showing 4 of 4 results
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Download
FileSet
DSR657AGH
released
Annotation file set
: Gene expression of liver sinusoidal endothelial cells cultured with 10nM insulin, 320µM palmitic acid and 320 µM oleic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR967TCE
released
Annotation file set
: Gene expression of liver sinusoidal endothelial cells cultured with 10nM insulin and 320µM palmitic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR193THB
released
Annotation file set
: Gene expression of liver sinusoidal endothelial cells cultured with 10nM insulin.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR881TMR
released
Annotation file set
: Gene expression of liver sinusoidal endothelial cells cultured with basal medium.
Lab:
Ines Cebola, Imperial College London
Project:
AMP