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Annotation type
2
target gene predictions
1
chromatin state
Annotation Category
2
Target gene links
1
cis-regulatory elements
Annotation type Category
1
Capture-C
1
ChIP-seq
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
5323
tissue
2517
primary cell
2352
cell line
462
in vitro differentiated cells
3
stem cell
Biosample term
1
H1-hESC
1
mesenchymal stem cell
mesendoderm
1
undifferentiated ESC (H9 cell line)
Organ
1
brain
1
connective tissue
1
embryo
Life stage
1
embryonic
Date released
1
August, 2017
1
March, 2020
1
September, 2023
Software used
1
chicago
1
chromhmm
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
1
Struan F.A. Grant, CHOP
Project
3
AMP
Collection Tags
1
AMP
1
DGA
RFA
2
AMP
1
AMP2
biosample_term_name!
mesendoderm
Showing 3 of 3 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR333DPA
released
Annotation file set
: A target gene prediction annotation in Human Mesenchymal Stem Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP