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Schema
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Annotation type
2
accessible chromatin
1
chromatin state
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ChIP-seq
Available data
6072
bed bed3+
3571
tsv
869
bed bed9
537
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
26
csv
13
bigBed narrowPeak
3
bam
2
bed gappedPeak
2
xls
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
1
liver
1
pancreatic alpha cell
pancreatic beta cell
1
pancreatic delta cell
Organ
2
epithelium
2
pancreas
1
liver
Life stage
2
unknown
Date released
2
September, 2022
1
August, 2017
Software used
2
macs
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
Collection Tags
2
T2D
RFA
3
AMP
biosample_term_name!
pancreatic beta cell
Showing 3 of 3 results
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FileSet
DSR025RWZ
released
Annotation file set
: Accessible chromatin from snATAC-seq of delta cells from human pancreatic islet samples
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR938VDA
released
Annotation file set
: Accessible chromatin from snATAC-seq of alpha cells from human pancreatic islet samples
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR241972
released
Annotation file set
: ChromHMM 18-state model for Liver
Lab:
AMP-T2D consortium
Project:
AMP