Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
caQTL
1
eQTL
1
gene expression
Annotation Category
2
Genetic variant effects
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
2
liver
2
subcutaneous adipose tissue
Organ
2
adipose tissue
2
connective tissue
2
liver
Life stage
2
adult
Date released
2
February, 2021
2
May, 2022
Software used
1
eigenmt
1
fastqtl
1
macs
1
r
1
rasqual
Lab
6699
AMP-T2D consortium
393
Bing Ren, UCSD
281
KPMP
144
Kyle Gaulton, UCSD
137
Jesse Engreitz, Stanford University
65
Stephen Parker, UMich
53
Katalin Susztak, Upenn
24
Ines Cebola, Imperial College London
19
Xin Sun, UCSD
9
Anna Gloyn, Oxford
8
Struan F.A. Grant, CHOP
5
ITG
5
Patrick T. Ellinor, Broad
4
Karen Mohlke, UNC
3
Stephen S. Rich Lab @UVA
2
Doug Phanstiel, UNC
Project
4
AMP
RFA
4
AMP
biosample_term_name!
spinal cord
month_released!
August, 2022
organ_slims!
penis
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR303OZW
released
Annotation file set
: Accessible chromatin annotation(consensus peaks) of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR306BCP
released
Annotation file set
: Gene expression annotation of subcutaneous adipose tissue for GSE135134
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR965YTD
released
Annotation file set
: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Lab:
Karen Mohlke, UNC
Project:
AMP