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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
chromatin state
2
differential activity
Annotation Category
5
Gene expression levels
2
cis-regulatory elements
Annotation type Category
5
single cell RNA-seq
2
ChIP-seq
Available data
14
bed bed3+
5
tsv
3
bigWig
2
bed bed9
File set status
7
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
5
Lymphatic Endothelial Cell
2
dermis lymphatic vessel endothelial cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
374
epithelium
328
kidney
133
brain
106
connective tissue
96
vasculature
89
pancreas
85
musculature of body
75
heart
74
blood vessel
71
lung
67
limb
58
intestine
42
liver
37
embryo
36
skin of body
35
large intestine
33
extraembryonic component
30
adipose tissue
26
bodily fluid
24
artery
24
blood
19
small intestine
18
bone element
16
placenta
15
adrenal gland
14
mammary gland
14
prostate gland
13
spinal cord
13
ureter
11
eye
11
thymus
10
gonad
10
nerve
10
penis
9
esophagus
8
lymph node
7
lymphatic vessel
7
spleen
6
lymphoid tissue
6
uterus
5
mouth
5
ovary
5
stomach
5
testis
5
thyroid gland
5
vein
3
breast
3
skeleton
3
tongue
3
urinary bladder
3
vagina
2
bronchus
1
bone marrow
1
nose
1
pituitary gland
Life stage
5
adult
2
unknown
Date released
5
September, 2023
2
September, 2022
Software used
3
r
2
chromhmm
2
deseq2
Lab
5
KPMP
2
AMP-T2D consortium
Project
5
KPMP
2
AMP
RFA
5
KPMP
2
AMP
biosample_term_name!
stomach
Showing 7 of 7 results
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Download
FileSet
DSR840KPU
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR737GXW
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR693ABL
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR065GDL
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR925JNK
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR492AJM
released
Annotation file set
: Chromatin states for BSS00264 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR019ZDM
released
Annotation file set
: Chromatin states for BSS00262 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP