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Citing CMDGA
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Annotation type
2
Fine-mapped variants
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
2
tsv
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
1
gastrocnemius medialis(Muscle - Skeletal)
1
left ventricle myocardium
Organ
12
brain
3
adipose tissue
3
blood vessel
3
connective tissue
3
heart
3
vasculature
2
artery
2
blood
2
bodily fluid
2
limb
2
liver
2
musculature of body
1
pancreas
1
spinal cord
Life stage
2
adult
Date released
2
March, 2020
Software used
147
r
78
encode-ccres
75
chromhmm
40
macs
9
abc
7
deltasvm
5
deeptools
5
samtools
5
umitools
4
qTLtools
2
eigenmt
2
gtex_eqtl:V8
2
gtex_finemapping_eQTL:caveman
2
gtex_finemapping_eQTL:caviar
2
gtex_finemapping_eQTL:dapg
2
hiccups
2
rasqual
1
deseq2
1
matrix-eQTL
1
nospecificsoft_customcode
0
unknown
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
tibial nerve
Showing 2 of 2 results
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Download
FileSet
DSR573OQV
released
Annotation file set
: Fine-mapping results from CAVIAR of gastrocnemius medialis(Muscle - Skeletal) for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR045PWN
released
Annotation file set
: Fine-mapping results from CAVIAR of left ventricle myocardium for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP