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Schema
Citing CMDGA
Clear Filters
Embeddings type
4
Gene expression
2
Accessible chromatin
Embeddings Category
6
umap
Underlying Assay
3
10X scRNA-seq
2
10X snATAC-seq
2
Smart-seq
1
10X snRNA-seq
Available data
6
h5ad
File set status
6
released
Organism
5
Homo sapiens
Biosample type
6
tissue
2
primary cell
Biosample term
3
lung
2
islet of Langerhans
2
pancreas
2
peripheral blood mononuclear cell
1
blood
Tissue term
3
blood
3
lung
2
pancreas
Organ
6
pancreas
3
blood
3
bodily fluid
3
lung
3
musculature of body
2
bone element
2
connective tissue
2
epithelium
2
heart
2
intestine
2
kidney
2
mouth
1
adipose tissue
1
bone marrow
1
eye
1
large intestine
1
liver
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
tongue
1
trachea
1
vasculature
Life stage
2
adult
Date released
2
August, 2021
2
May, 2022
2
September, 2021
Lab
2
AMP-T2D consortium
2
Kyle Gaulton, UCSD
2
Xin Sun, UCSD
Project
2
AMP
2
LungMap
2
T1D
RFA
2
AMP
2
LungMap2
2
T1D
biosample_term_name!
uterus
tissue_term_name!
thymus
Showing 6 of 6 results
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FileSet
DSR304MNH
released
Embeddings file set
: The human cell atlas of Lung from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR284DTT
released
Embeddings file set
: The human cell atlas of Blood from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR514DTZ
released
Embeddings file set
: snRNA-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR722OVR
released
Embeddings file set
: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR675TJW
released
Embeddings file set
: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D