Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
variant allelic effects
Annotation Category
3
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
5
DNase-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
110
monocyte
66
heart
65
stomach
61
HeLa-S3
52
brain
51
muscle of arm
50
lung
47
CD8-positive, alpha-beta T cell
47
small intestine
46
adrenal gland
45
H1-hESC
45
placenta
44
A549
43
large intestine
43
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
39
neural progenitor cell
37
thymus
35
K562
35
retina
34
B cell
34
right lung
32
hematopoietic multipotent progenitor cell
32
liver
31
endothelial cell
30
fibroblast
27
CD14-positive monocyte
27
spinal cord
26
spleen
24
heart left ventricle
23
CD4-positive, alpha-beta memory T cell
23
macrophage
22
adipocyte
22
hepatocyte
22
smooth muscle cell
21
MCF-7
21
pericyte cell
20
adipose tissue
20
breast cancer cell
20
pigmented layer of retina
19
HFFc6
19
keratinocyte
18
foreskin keratinocyte
18
pancreas
17
T cell
17
foreskin fibroblast
17
sigmoid colon
17
trophoblast cell
16
HepG2
16
cardiac muscle cell
16
islet of Langerhans
16
natural killer cell
16
regulatory T cell
15
CD8-positive, alpha-beta memory T cell
15
GM12878
15
H9
15
ovary
15
psoas muscle
15
retinal pigment epithelial cell
14
astrocyte
14
endothelial cell of umbilical vein
14
gastrocnemius medialis
14
mesenchymal stem cell
14
mononuclear cell
14
pancreatic ductal cell
14
tibial nerve
14
transverse colon
13
body of pancreas
13
fibroblast of cardiac tissue
13
osteoblast
13
thyroid gland
13
upper lobe of left lung
12
CD4-positive, alpha-beta T cell
12
EndoC_BH1
12
coronary artery
12
excitatory neuron
12
fibroblast of lung
12
heart right ventricle
12
layer of hippocampus
12
mammary epithelial cell
12
muscle of trunk
12
neuroblastoma cell
12
pancreatic beta cell
12
testis
11
T-helper 1 cell
11
caudate nucleus
11
chorionic villus
11
endothelial cell of hepatic sinusoid
11
mammary gland epithelial cell
11
skeletal muscle myoblast
10
Peyer's patch
10
Rhabdomyosarcoma
10
bronchial epithelial cell
10
embryonic stem cell
10
endocrine pancreas
10
gastric cancer cell
10
neuronal stem cell
10
pancreatic acinar cell
10
pancreatic alpha cell
10
prostate gland
10
skeletal muscle tissue
9
T-helper 2 cell
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
erythroblast
9
fibroblast of dermis
9
liposarcoma
9
lymphocyte
9
neurosphere
9
pancreatic delta cell
9
skeletal muscle satellite cell
9
skin fibroblast
9
tibial artery
8
22Rv1
8
B-lymphoblastoid cell line
8
IMR-90
8
breast epithelium
8
choroid plexus epithelial cell
8
fibroblast cell line
8
left cardiac atrium
8
pituitary stalk
8
right atrium auricular region
8
temporal lobe
8
trophoblast
7
CD4-positive helper T cell
7
GM06990
7
GM12864
7
GM12865
7
GM19240
7
HAP-1
7
HL-60
7
HT-29
7
Jurkat
7
T-helper 17 cell
7
aorta
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
lower leg skin
7
mesendoderm
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
neutrophil
7
omental fat pad
7
substantia nigra
7
thoracic aorta
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
Ammon's horn
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12875
6
GM19238
6
GM19239
6
GM23248
6
HUES8
6
LNCAP
6
NAMALWA cell
6
SK-N-MC
6
ascending aorta
6
chondrocyte
6
cingulate gyrus
6
colon epithelial cell
6
endometrium adenocarcinoma
6
esophagus
6
eye
6
fibroblast of pulmonary artery
6
hESC cell
6
immortal human breast epithelial cell line cell
6
neuroblastoma cell line
6
parathyroid adenoma
6
tongue
5
cardiac fibroblast
5
CyT49
5
Daoy
5
Ewing sarcoma
5
GM08714
5
GM10248
5
GM10266
5
GM12891
5
GM12892
5
GM18507
H7-hESC
5
HCT-116 cell
5
HCT116
5
HuH-7
5
KARPAS-422 cell
5
LHCN-M2
5
LoVo cell
5
MG63
5
OCI-LY7
Organ
5
brain
5
connective tissue
5
vasculature
Life stage
2
adult
1
fetal
1
unknown
Date released
3
January, 2020
2
May, 2020
Software used
3
macs
2
deltasvm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
H7-hESC
organ_slims!
kidney
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR631MKV
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart cardiac fibroblast DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR529VUE
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart cardiac fibroblast adult DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR353QAR
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast adult from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR663NVC
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR608VUV
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast unknow from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP