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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
10
SK-N-DZ
10
SK-N-SH
10
pituitary stalk
8
SK-N-MC
7
BE(2)-C
7
GM23248
6
Daoy
5
A172
5
M059J
5
fibroblast of cardiac tissue
4
H54
4
HT1080
4
U-87 MG
3
choroid plexus epithelial cell
3
foreskin fibroblast
3
medulloblastoma
2
adipose tissue derived mesenchymal stem cell
2
chondrocyte
2
dermis lymphatic vessel endothelial cell
2
hepatic stellate cell
2
skin fibroblast
1
BE2C
1
adipose-derived mesenchymal stem cell
1
brain pericyte
1
fibroblast
1
fibroblast of the conjunctiva
Disease term
3
glioblastoma
Organ
5
brain
0
connective tissue
0
lymphatic vessel
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR049DFV
released
Annotation file set
: Candidate regulatory elements for BSS00004 A172 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR645HDI
released
Annotation file set
: Target gene predictions for BSS00004 A172 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR837WUV
released
Annotation file set
: Chromatin states for BSS00004 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR394FPB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A172
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR069BSZ
released
Annotation file set
: Accessible chromatin annotation for Neural A172 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP