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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
85
heart
73
brain
72
kidney
67
muscle of arm
62
lung
62
stomach
59
placenta
57
muscle of leg
55
large intestine
54
muscle of back
54
small intestine
53
H1-hESC
52
HeLa-S3
52
left lung
51
neural progenitor cell
47
thymus
45
right lung
42
right kidney
40
renal cortex interstitium
40
renal pelvis
36
left kidney
35
adrenal gland
34
spinal cord
28
islet of Langerhans
27
CD8-positive, alpha-beta T cell
27
macrophage
26
endothelial cell
26
monocyte
25
fibroblast
23
CD4-positive, alpha-beta memory T cell
23
EndoC_BH1
22
foreskin keratinocyte
22
liver
21
K562
21
pancreatic ductal cell
20
breast cancer cell
20
trophoblast cell
19
HFFc6
19
heart left ventricle
18
B cell
18
adipocyte
18
embryonic stem cell
18
endothelial cell of umbilical vein
18
foreskin fibroblast
18
keratinocyte
17
hepatocyte
17
retina
17
smooth muscle cell
16
cardiac muscle cell
16
chorionic villus
16
muscle of trunk
16
retinal pigment epithelial cell
15
H9
15
HepG2
15
T-helper 17 cell
15
induced pluripotent stem cell
14
heart right ventricle
14
osteoblast
13
T cell
13
astrocyte
13
bronchial epithelial cell
13
excitatory neuron
13
mesenchymal stem cell
13
neurosphere
13
pancreatic beta cell
13
pericyte cell
13
regulatory T cell
12
fibroblast of cardiac tissue
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
neuroblastoma cell
12
pancreatic acinar cell
11
common myeloid progenitor, CD34-positive
11
left cardiac atrium
11
left renal pelvis
11
pancreatic delta cell
11
right renal pelvis
11
spleen
10
22Rv1
10
GM12878
10
Rhabdomyosarcoma
10
choroid plexus epithelial cell
10
epithelial cell of prostate
10
fibroblast of lung
10
gastric cancer cell
10
lymphocyte
10
neutrophil
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
skeletal muscle myoblast
10
trophoblast
9
HEK293
9
SK-N-DZ
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
erythroblast
9
liposarcoma
9
neuronal stem cell
9
pancreatic alpha cell
9
tongue
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
IMR-90
8
NAMALWA cell
8
T-helper 2 cell
8
endodermal cell
8
fibroblast cell line
8
limb
8
mammary gland epithelial cell
8
pancreatic stellate cell
8
skeletal muscle fiber
8
skin fibroblast
8
testis
7
AG04449 cell
7
AG04450 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD8-positive, alpha-beta memory T cell
7
CMK
7
MG63
SK-N-MC
7
SK-N-SH
7
T-helper 1 cell
7
WERI-Rb-1
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast of dermis
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
glomerular endothelial cell
7
hematopoietic multipotent progenitor cell
7
mammary epithelial cell
7
mesendoderm
7
ovary
7
skeletal muscle tissue
6
CD4-positive, alpha-beta T cell
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM12891
6
GM12892
6
GM18507
6
HUES6
6
HUES8
6
MCF-7
6
NT2-D1 cell
6
WI38
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
glomerular visceral epithelial cell
6
hESC cell
6
iPSC derived cell line
6
mesodermal cell
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neuroblastoma cell line
6
pancreas
6
skeletal muscle satellite cell
5
CD4-positive helper T cell
5
CyT49
5
Ewing sarcoma
5
GM19240
5
H7-hESC
5
HK-2 cell
5
HUES64
5
Jurkat
5
L1-S8
5
PC-9
5
SGBS preadipocytes
5
acute myeloid leukemia
5
adipose tissue
5
colon epithelial cell
5
enterocyte
5
kidney epithelial cell
5
neural cell
5
non-pigmented ciliary epithelial cell
5
osteosarcoma
5
prostate cancer cell line
5
psoas muscle
5
pulmonary artery endothelial cell
5
renal cortical epithelial cell
5
skeletal muscle cell
5
skin of body
5
type I muscle cell
5
umbilical cord
4
A549
4
A673
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
CD14-positive monocyte
4
COLO205
Organ
4
lung
Life stage
adult
Date released
2
February, 2021
1
June, 2020
1
October, 2022
Software used
3
macs
abc
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
SK-N-MC
relevant_life_stage!
adult
software_used.software.name!
abc
Showing 4 of 4 results
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Download
FileSet
DSR259UTD
released
Annotation file set
: Binding sites annotation for A549 (A549) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761KYR
released
Annotation file set
: Histone modifications annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR378GKW
released
Annotation file set
: Binding sites annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR008HJP
released
Annotation file set
: Accessible chromatin annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP