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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
6
NAMALWA cell
6
SK-N-DZ
6
SK-N-SH
4
glomerular visceral epithelial cell
4
heart
4
psoas muscle
3
A673
3
BE(2)-C
3
CD14-positive, CD16-negative classical monocyte
3
CMK
3
DND-41
3
Daoy
3
G401
3
GM03348
3
GM08714
3
HepG2
3
MG63
3
SJCRH30
3
SK-N-MC
3
WERI-Rb-1
3
heart left ventricle
3
heart right ventricle
3
lung
3
lymphocyte
3
medulloblastoma
3
sigmoid colon
3
small intestine
3
spleen
3
stomach
3
thymus
3
urothelium cell line
2
alternatively activated macrophage
2
erythroblast
2
mature neutrophil
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
cardiac atrium fibroblast
1
pancreatic ductal cell
0
A549
Organ
3
thymus
Life stage
57
adult
38
embryonic
3
child
1
young adult
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
bronchial epithelial cell
choroid plexus epithelial cell
Showing 3 of 3 results
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Download
FileSet
DSR008RJQ
released
Annotation file set
: Candidate regulatory elements for BSS01825 thymus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR364FEE
released
Annotation file set
: Target gene predictions for BSS01825 thymus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649ZPZ
released
Annotation file set
: Chromatin states for BSS01825 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP