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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
candidate regulatory elements
2
target gene predictions
1
histone modifications
Annotation Category
5
cis-regulatory elements
2
Target gene links
Annotation type Category
6
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
1
bed bed9
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
4
cell line
3
primary cell
Biosample term
51
muscle of arm
43
muscle of leg
41
muscle of back
16
psoas muscle
14
gastrocnemius medialis
13
muscle of trunk
10
skeletal muscle tissue
9
skeletal muscle satellite cell
8
esophagus muscularis mucosa
7
skeletal muscle fiber
7
stomach smooth muscle
6
LHCN-M2
6
gastroesophageal sphincter
6
type I muscle cell
6
type II muscle cell
5
myotube
5
skeletal muscle cell
4
A673
4
SJCRH30
3
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
forelimb muscle
2
respiratory system smooth muscle
2
somatic muscle myotube
1
aortic smooth muscle cell
1
hindlimb muscle
1
rectal smooth muscle tissue
1
skeletal muscle
1
smooth muscle tissue
Disease term
2
Ewing sarcoma
Organ
7
musculature of body
1
blood vessel
1
vasculature
Life stage
2
child
1
young adult
Date released
4
February, 2021
2
September, 2022
1
May, 2021
Software used
3
macs
2
r
1
abc
1
encode-ccres
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
Showing 7 of 7 results
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Download
FileSet
DSR538XCP
released
Annotation file set
: Candidate regulatory elements for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887BDZ
released
Annotation file set
: Target gene predictions for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR958EYW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A673
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR933DVF
released
Annotation file set
: Histone modifications annotation for Muscle Skeletal_myotubes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR885IXC
released
Annotation file set
: Binding sites annotation for Muscle Skeletal_myotubes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR152SRX
released
Annotation file set
: Binding sites annotation for Cardiovascular Aortic_smooth_muscle_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR293FCZ
released
Annotation file set
: enhancer-gene predicton of A673-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP