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Schema
Citing CMDGA
Clear Filters
Annotation type
2
differential activity
2
histone modifications
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
single cell RNA-seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
115
monocyte
47
CD8-positive, alpha-beta T cell
30
endothelial cell
29
fibroblast
28
common myeloid progenitor, CD34-positive
26
macrophage
23
CD14-positive monocyte
23
hepatocyte
22
B cell
20
pericyte cell
19
smooth muscle cell
15
CD4-positive, alpha-beta T cell
15
regulatory T cell
14
CD4-positive, alpha-beta memory T cell
14
T cell
14
astrocyte
14
foreskin fibroblast
13
keratinocyte
13
mammary epithelial cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
natural killer cell
13
osteoblast
13
pancreatic ductal cell
12
excitatory neuron
12
pancreatic beta cell
11
erythroblast
11
foreskin keratinocyte
11
neutrophil
11
pancreatic alpha cell
11
skeletal muscle myoblast
10
T-helper 1 cell
10
fibroblast of lung
10
pancreatic acinar cell
10
pancreatic delta cell
10
trophoblast cell
9
mature neutrophil
9
skeletal muscle satellite cell
8
CD8-positive, alpha-beta memory T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
bronchial epithelial cell
8
glutamatergic neuron
8
mononuclear cell
8
retinal pigment epithelial cell
7
cardiac muscle cell
7
mammary gland epithelial cell
7
neurosphere
7
skeletal muscle fiber
7
type II pneumocyte
6
T-cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
fibroblast of cardiac tissue
6
fibroblast of dermis
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
hepatic stellate cell
6
memory B cell
6
mesenchymal stem cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
type I muscle cell
6
type II muscle cell
5
CD14-positive, CD16-negative classical monocyte
5
CD1c-positive myeloid dendritic cell
5
CD4-positive helper T cell
5
alternatively activated macrophage
5
basal cell
5
epithelial cell of prostate
5
epithelial cell of proximal tubule
5
gabaergic neuron
5
glomerular endothelial cell
5
inhibitory neuron
5
kidney glomerular epithelial cell
5
kidney tubule cell
5
luminal epithelial cell of mammary gland
5
mast cell
5
myofibroblast cell
5
naive B cell
5
plasma cell
5
renal cortical epithelial cell
5
skin fibroblast
5
tracheal epithelial cell
4
activated CD4-positive, alpha-beta T cell
4
acute myeloid leukemia cell
4
aortic adventitial fibroblast
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
blood vessel smooth muscle cell
4
enteric smooth muscle cell
4
epithelial cell of esophagus
4
fibroblast of breast
4
foreskin melanocyte
4
glomerular visceral epithelial cell
4
inflammatory macrophage
4
kidney epithelial cell
4
megakaryocyte
4
mesothelial cell
4
myoepithelial cell of mammary gland
4
pancreatic polypeptide-secreting cell
4
preadipocyte
4
renal epithelial cell
4
skeletal muscle cell
4
smooth muscle cell of the esophagus
4
type I pneumocyte
3
Ishikawa
3
T follicular helper cell
3
Th1 cell
3
Th17 cell
3
activated CD8-positive, alpha-beta T cell
3
adipocyte
3
blood cell
3
bone marrow cell
3
brain pericyte
3
cardiac fibroblast
3
ciliated cell
3
club cell
3
endocardial cell
3
enteric neuron
3
erythroid cell
3
fibroblast of peridontal ligament
3
goblet cell
3
iris pigment epithelial cell
3
microglial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive T cell
3
naive t cell
3
neoplastic cell
3
non-pigmented ciliary epithelial cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic stellate cell
3
parietal cell
3
peptic cell
3
peripheral blood stem cell
3
plasmacytoid dendritic cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
schwann cell
3
thyroid follicular cell
3
type B pancreatic cell
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Adipose stromal cell
2
B Cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
M2 Macrophage
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Muller cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Parietal Epithelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
Rhabdoid Tumor of the Kidney
2
Schwann cell
2
T Cell
2
Th2 cell
2
Transitional Principal-Intercalated Cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
Organ
2
connective tissue
Life stage
2
adult
Date released
2
February, 2021
2
September, 2023
Software used
r
2
deseq2
2
macs
Lab
2
AMP-T2D consortium
2
KPMP
Project
2
AMP
2
KPMP
RFA
2
AMP
2
KPMP
organ_slims!
vasculature
software_used.software.name!
r
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR928DQV
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Fibroblast between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR771MAO
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Fibroblast between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR229QNR
released
Annotation file set
: Histone modifications annotation for Blood SP-49 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267JTF
released
Annotation file set
: Histone modifications annotation for Blood Lymphoma,_Mantle-Cell from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP