Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
differential activity
Annotation Category
5
Gene expression levels
Annotation type Category
5
single cell RNA-seq
Available data
5
tsv
File set status
5
released
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
128
monocyte
69
heart
64
stomach
62
HeLa-S3
57
A549
56
brain
56
kidney
52
H1-hESC
51
lung
50
muscle of arm
49
small intestine
48
adrenal gland
45
placenta
44
CD8-positive, alpha-beta T cell
44
muscle of leg
44
neural progenitor cell
41
large intestine
40
common myeloid progenitor, CD34-positive
40
liver
39
left lung
39
muscle of back
38
K562
37
B cell
37
thymus
36
islet of Langerhans
35
retina
34
endothelial cell
34
right lung
32
hematopoietic multipotent progenitor cell
32
right kidney
31
hepatocyte
30
macrophage
30
renal pelvis
29
fibroblast
29
renal cortex interstitium
27
CD14-positive monocyte
27
CD4-positive, alpha-beta memory T cell
27
adipose tissue
27
heart left ventricle
27
left kidney
26
spinal cord
24
regulatory T cell
24
smooth muscle cell
24
spleen
22
T cell
22
adipocyte
22
pericyte cell
22
tibial nerve
21
CD8-positive, alpha-beta memory T cell
21
EndoC_BH1
21
pancreatic ductal cell
20
T-helper 1 cell
20
body of pancreas
20
pigmented layer of retina
19
HFFc6
19
T-helper 17 cell
19
coronary artery
18
MCF-7
18
caudate nucleus
18
right atrium auricular region
18
trophoblast cell
17
mononuclear cell
17
pancreas
17
pancreatic beta cell
17
psoas muscle
17
sigmoid colon
17
tibial artery
16
endothelial cell of hepatic sinusoid
16
heart right ventricle
16
natural killer cell
16
ovary
15
T-helper 2 cell
15
astrocyte
15
frontal cortex
15
mesenchymal stem cell
15
pancreatic acinar cell
15
pancreatic delta cell
15
subcutaneous adipose tissue
15
thyroid gland
14
endothelial cell of umbilical vein
14
pancreatic alpha cell
13
GM12878
13
HepG2
13
ascending aorta
13
excitatory neuron
13
fibroblast of cardiac tissue
13
fibroblast of lung
13
gastrocnemius medialis
13
neutrophil
13
omental fat pad
13
substantia nigra
13
transverse colon
12
embryonic stem cell
12
endocrine pancreas
12
foreskin keratinocyte
12
mammary gland epithelial cell
12
muscle of trunk
12
retinal pigment epithelial cell
12
skeletal muscle satellite cell
11
Ammon's horn
11
aorta
11
cerebellum
11
chorionic villus
11
erythroblast
11
fibroblast of dermis
11
keratinocyte
11
putamen
11
skeletal muscle myoblast
11
testis
10
H9
10
Peyer's patch
10
foreskin fibroblast
10
left cardiac atrium
10
pancreatic stellate cell
10
skeletal muscle tissue
9
kidney tubule cell
9
layer of hippocampus
9
osteoblast
9
skin fibroblast
9
upper lobe of left lung
8
SK-N-SH
8
colon epithelial cell
8
immortal human breast epithelial cell line cell
8
lymphocyte
8
naive T cell
8
pituitary stalk
8
progenitor cell of endocrine pancreas
8
skeletal muscle fiber
8
temporal lobe
8
thoracic aorta
8
trophoblast
7
CD4-positive, alpha-beta T cell
7
NAMALWA cell
7
SK-N-DZ
7
breast epithelium
7
cardiac muscle cell
7
chorion membrane
7
cingulate gyrus
7
endometrium adenocarcinoma
7
esophagus
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
glomerular endothelial cell
7
hepatic stellate cell
7
limb
7
lymphoblastoid cell line
7
memory B cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
6
22Rv1
6
Brodmann (1909) area 46
6
CD4-positive helper T cell
6
GM19240
6
IMR-90
6
KARPAS-422 cell
6
LNCaP clone FGC
6
SGBS preadipocytes
6
T47D
6
amygdala
6
anterior cingulate cortex
6
colonic mucosa
6
glomerular visceral epithelial cell
6
induced pluripotent stem cell
6
kidney glomerular epithelial cell
6
left renal cortex interstitium
6
left renal pelvis
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
neurosphere
6
right lobe of liver
6
right renal pelvis
6
tongue
6
type I muscle cell
5
cardiac fibroblast
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
BE(2)-C
5
BJ cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Caco-2 cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
5
epithelium
5
kidney
Life stage
5
adult
Date released
5
September, 2023
Software used
3
r
2
deseq2
Lab
5
KPMP
Project
5
KPMP
RFA
5
KPMP
biosample_term_name!
HCT-116 cell
neurosphere
month_released!
February, 2021
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR583RXX
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2 between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR435UJD
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2 between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR614IST
released
Annotation file set
: Gene expression annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2 of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR643WAR
released
Annotation file set
: Gene expression annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2 of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR412CXZ
released
Annotation file set
: Gene expression annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2 of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP