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Citing CMDGA
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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
86
stomach
31
adipose tissue
25
adipocyte
19
foreskin fibroblast
19
subcutaneous adipose tissue
18
fibroblast
18
mesenchymal stem cell
16
fibroblast of lung
16
omental fat pad
15
fibroblast of cardiac tissue
14
osteoblast
12
fibroblast of dermis
12
pericyte cell
11
skin fibroblast
9
hepatic stellate cell
9
stomach smooth muscle
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
7
GM23248
7
chondrocyte
7
gastroesophageal sphincter
6
pancreatic stellate cell
6
subcutaneous abdominal adipose tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
cardiac fibroblast
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
5
mesangial cell
4
HT1080
4
adult endothelial progenitor cell
4
bone tissue
4
mucosa of stomach
4
preadipocyte
4
stromal cell of bone marrow
4
visceral abdominal adipose tissue
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
brain pericyte
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
cardiac fibroblast
2
adipose tissue derived mesenchymal stem cell
2
articular chondrocyte
2
columnar chondrocyte
2
fat cell
2
parietal cell
2
peptic cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
esophagus - gastroesophageal junction
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
foveolar cell of stomach
1
gastric (mucosa of stomach)
1
kidney interstitial fibroblast
1
luteal cell
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
stomach neuroendocrine cell
1
stromal cell
1
white adipose cell
1
white adipose tissue
Organ
1
connective tissue
0
stomach
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
files.file_type!
bigWig
organ_slims!
mouth
Showing 1 of 1 results
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Download
FileSet
DSR125CCG
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP