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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
30
fibroblast
23
adipocyte
21
pericyte cell
20
adipose tissue
17
foreskin fibroblast
15
mesenchymal stem cell
14
fibroblast of cardiac tissue
14
osteoblast
13
fibroblast of lung
10
skin fibroblast
9
fibroblast of dermis
9
omental fat pad
8
hepatic stellate cell
7
chondrocyte
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
subcutaneous adipose tissue
6
GM23248
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
4
brain pericyte
4
cardiac fibroblast
4
fibroblast of peridontal ligament
4
fibroblast of the aortic adventitia
4
fibroblast of the conjunctiva
4
megakaryocyte
4
pancreatic stellate cell
4
preadipocyte
3
HT1080
3
fibroblast of gingiva
3
mononuclear cell of bone marrow
3
pulmonary interstitial fibroblast
3
stromal cell of bone marrow
2
adipose tissue derived mesenchymal stem cell
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
cartilage tissue
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
luteal cell
2
mesangial cell
2
stromal cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
adult endothelial progenitor cell
1
beige adipocyte
1
bone marrow cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fat cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
white adipose cell
1
white adipose tissue
Organ
1
connective tissue
0
bone marrow
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
June, 2021
Showing 1 of 1 results
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Download
FileSet
DSR125CCG
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP