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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
14
endothelial cell of hepatic sinusoid
11
hepatocyte
8
endothelial cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
fibroblast
5
macrophage
4
cartilage tissue
4
natural killer cell
3
B cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
endothelial cell of lymphatic vessel
3
mast cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
smooth muscle cell
2
adipocyte
2
articular chondrocyte
2
dendritic cell
2
endocardial cell
2
kidney distal convoluted tubule epithelial cell
2
neuronal stem cell
2
pancreatic polypeptide-secreting cell
2
pericyte cell
2
regular ventricular cardiac myocyte
2
renal principal cell
2
subcutaneous adipose tissue
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
GM12878
1
T cell
1
T-helper 17 cell
1
alternatively activated macrophage
1
cell
1
cholangiocyte
1
effector CD8-positive, alpha-beta T cell
1
epithelial cell of proximal tubule
1
erythrocyte
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
myofibroblast cell
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic stellate cell
1
proximal tubule cells with injury markers
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal intercalated cell
1
synovial joint
Disease term
2
heart failure
1
liver disease
Life stage
3
adult
Date released
3
May, 2024
Lab
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Project
3
AMP
RFA
3
AMP2
biosample_term_name!
mesendoderm
lab.title!
AMP-T2D consortium
Showing 3 of 3 results
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Download
FileSet
DSR395FXU
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of B cell derived from liver snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR027LWE
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of B cell derived from RV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR139EZL
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of B cell derived from LV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP