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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
1
target gene predictions
Annotation Category
6
cis-regulatory elements
1
Target gene links
Annotation type Category
7
DNase-seq
6
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
23
stomach
19
CD14-positive monocyte
18
heart
17
lung
17
muscle of arm
16
adrenal gland
15
common myeloid progenitor, CD34-positive
15
kidney
15
large intestine
15
muscle of back
15
muscle of leg
15
small intestine
13
brain
13
left lung
13
placenta
11
renal cortex interstitium
11
right lung
10
CD8-positive, alpha-beta T cell
10
pituitary stalk
10
renal pelvis
10
right kidney
10
spleen
10
thymus
9
CD4-positive, alpha-beta T cell
9
hematopoietic multipotent progenitor cell
9
left kidney
9
pericyte cell
8
spinal cord
7
B cell
7
H9
7
foreskin keratinocyte
7
liver
7
smooth muscle cell
6
T-cell
6
adipocyte
6
cardiac muscle cell
6
dendritic cell
6
endothelial cell
6
foreskin fibroblast
6
heart left ventricle
sigmoid colon
6
trophoblast cell
5
CD4-positive, alpha-beta memory T cell
5
MCF-7
5
body of pancreas
5
endothelial cell of umbilical vein
5
gastrocnemius medialis
5
muscle of trunk
5
ovary
5
subcutaneous abdominal adipose tissue
5
thyroid gland
5
transverse colon
4
A549
4
Peyer's patch
4
WI38
4
astrocyte
4
breast epithelium
4
chorionic villus
4
dermis blood vessel endothelial cell
4
esophagus squamous epithelium
4
fibroblast
4
fibroblast of lung
4
gastroesophageal sphincter
4
keratinocyte
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
mammary epithelial cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
natural killer cell
4
neurosphere
4
pancreas
4
peripheral blood mononuclear cell
4
psoas muscle
4
right renal pelvis
4
testis
4
upper lobe of left lung
3
HeLa-S3
3
LNCAP
3
MCF 10A
3
SK-N-SH
3
T-helper 1 cell
3
cardiac fibroblast
3
colon epithelial cell
3
endocrine pancreas
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
foreskin melanocyte
3
heart right ventricle
3
hepatocyte
3
layer of hippocampus
3
mesenchymal stem cell
3
mesodermal cell
3
neuronal stem cell
3
omental fat pad
3
pancreatic A cell
3
parathyroid adenoma
3
retina
3
right renal cortex interstitium
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
3
type B pancreatic cell
3
uterus
2
22Rv1
2
A673
2
AG10803
2
BJAB cell
2
CD4-positive helper T cell
2
GM12878
2
HAP-1
2
HEK293
2
HT-29
2
HepG2
2
IMR-90
2
Jurkat
2
K562
2
MCF 10A cell
2
MM.1S
2
NAMALWA
2
OCI-LY7
2
PC-9
2
Panc1
2
SK-N-DZ
2
T-helper 17 cell
2
T-helper 2 cell
2
THP-1
2
U937
2
adipose tissue
2
angular gyrus
2
aorta
2
ascending aorta
2
bipolar neuron
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
cortical cell of adrenal gland
2
dermis microvascular lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
enteric smooth muscle cell
2
esophagus
2
eye
2
fibroblast of breast
2
fibroblast of dermis
2
gabaergic neuron
2
glutamatergic neuron
2
iPS DF 19.11
2
luminal epithelial cell of mammary gland
2
lung microvascular endothelial cell
2
macrophage
2
mesendoderm
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
myotube
2
neural cell
2
neuroepithelial stem cell
2
neutrophil
2
osteoblast
2
pancreatic acinar cell
2
pancreatic ductal cell
2
placental basal plate
2
prostate gland
2
regulatory T cell
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
thoracic aorta
2
tongue
2
trophoblast
2
type II pneumocyte
2
vagina
1
A172
1
ACC112
1
ACHN
1
AG04449
1
AG04450
1
AG09309
1
AG09319
1
Ammon's horn
1
B cell, CD19-positive
1
BE2C
1
BJ
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
Life stage
5
adult
1
unknown
Date released
5
February, 2021
1
February, 2024
1
May, 2021
Software used
27
macs
18
r
8
chromhmm
6
encode-ccres
1
abc
1
chicago
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
biosample_term_name!
sigmoid colon
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR795LWH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR821WTF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR417HOY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR850MEX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR038LBA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838SUF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR143KXJ
released
Annotation file set
: enhancer-gene predicton of B_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP