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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
primary cell
4
in vitro differentiated cells
Biosample term
90
heart
86
stomach
73
brain
68
lung
67
muscle of arm
63
small intestine
62
A549
62
adrenal gland
60
placenta
58
muscle of leg
55
large intestine
54
muscle of back
52
left lung
50
neural progenitor cell
48
liver
48
thymus
45
right lung
43
hematopoietic multipotent progenitor cell
43
islet of Langerhans
40
retina
35
spinal cord
34
heart left ventricle
34
spleen
31
adipose tissue
26
MCF-7
25
K562
25
tibial nerve
24
body of pancreas
23
EndoC_BH1
23
sigmoid colon
22
caudate nucleus
22
pancreas
20
adipocyte
20
breast cancer cell
20
coronary artery
20
ovary
20
psoas muscle
20
subcutaneous adipose tissue
19
heart right ventricle
19
pigmented layer of retina
19
right atrium auricular region
18
gastrocnemius medialis
18
substantia nigra
18
thyroid gland
18
tibial artery
18
transverse colon
17
H1-hESC
17
HepG2
17
embryonic stem cell
17
muscle of trunk
17
omental fat pad
17
testis
16
chorionic villus
16
induced pluripotent stem cell
16
layer of hippocampus
16
skeletal muscle tissue
16
upper lobe of left lung
15
ascending aorta
15
cerebellum
15
frontal cortex
14
endocrine pancreas
14
prostate gland
14
putamen
13
HeLa-S3
13
Peyer's patch
13
aorta
13
temporal lobe
12
Ammon's horn
12
lymphoblastoid cell line
12
mesenchymal stem cell
12
neuroblastoma cell
11
breast epithelium
11
cardiac muscle cell
10
22Rv1
10
GM12878
10
H9
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
thoracic aorta
10
trophoblast
9
IMR-90
9
NAMALWA cell
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
liposarcoma
9
parathyroid adenoma
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
HAP-1
8
HL-60
8
HT-29
8
KARPAS-422 cell
8
MM.1S
8
OCI-LY7
8
cingulate gyrus
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
pituitary stalk
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19240
7
GM23248
7
Jurkat
7
LHCN-M2
7
LNCaP clone FGC
7
LoVo cell
7
MG63
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
eye
7
neuronal stem cell
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM19238
6
GM19239
6
H7-hESC
6
HUES6
6
HuH-7
6
KBM-7
6
LNCAP
6
NT2-D1 cell
6
OCI-LY1
6
PC-9
6
SJSA1
6
SW480
6
WI38
6
anterior cingulate cortex
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
hESC cell
6
hypothalamus
6
mesodermal cell
6
midbrain
6
middle frontal gyrus
6
mucosa of rectum
6
neuroblastoma cell line
6
nucleus accumbens
6
occipital lobe
6
superior temporal gyrus
6
urinary bladder
5
A172
5
A673
5
C1 segment of cervical spinal cord
5
Ewing sarcoma
5
GM04503
5
GM04504
5
GM18507
5
H4
5
HCT-116 cell
5
HK-2 cell
5
HUES64
5
L1-S8
5
M059J
5
NB4
5
OCI-LY3
5
PC-3
5
RPMI8226
5
RWPE1
5
Rh-4 cell
5
SGBS preadipocytes
Organ
kidney
Date released
2
February, 2021
2
June, 2020
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_type!
primary cell
month_released!
February, 2024
organ_slims!
kidney
Showing 4 of 4 results
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Download
FileSet
DSR801NZA
released
Annotation file set
: Histone modifications annotation for Blood CD20+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR759UOG
released
Annotation file set
: Histone modifications annotation for Blood B-cell_BRACKETLCD19+BRACKETR from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR924GPB
released
Annotation file set
: Accessible chromatin annotation for Blood CD20+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR006MLI
released
Annotation file set
: Accessible chromatin annotation for Blood B-cell (CD19+) from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP