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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
chromatin state
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
DNase-seq
1
ChIP-seq
1
RNA-seq
Available data
2
bed bed3+
2
bigWig
1
bed bed9
1
bigBed bed9
1
tsv
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
cell line
Biosample term
3
cardiac fibroblast
2
Ammon's horn
2
SGBS preadipocytes
2
aorta
2
brain
2
cardiac muscle cell
2
caudate nucleus
2
coronary artery
2
endothelial cell of umbilical vein
2
frontal cortex
2
heart
2
heart left ventricle
2
kidney
2
omental fat pad
2
pancreas
2
putamen
2
right atrium auricular region
2
tibial artery
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
adipose tissue
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
body of pancreas
1
brain microvascular endothelial cell
1
brain pericyte
1
cerebellar cortex
1
cerebellum
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
fetal heart
1
forelimb muscle
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hepatic stellate cell
1
hepatocyte
1
hypothalamus
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left renal pelvis
1
middle frontal gyrus
1
muscle of arm
1
muscle of leg
1
nucleus accumbens
1
occipital lobe
1
pons
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
retinal pigment epithelial cell
1
right cardiac atrium
1
right lobe of liver
1
right renal pelvis
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
subcutaneous adipose tissue
1
substantia nigra
1
superior temporal gyrus
1
tibial nerve
Organ
2
brain
1
epithelium
1
kidney
1
spinal cord
Life stage
2
fetal
1
adult
1
child
Date released
51
September, 2022
22
February, 2021
4
January, 2020
3
February, 2020
3
March, 2020
2
January, 2022
2
June, 2020
2
May, 2020
1
August, 2021
1
November, 2019
Software used
2
macs
1
chromhmm
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR072MPX
released
Annotation file set
: Gene expression summary of TPM of brain spinal cord from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR833MWK
released
Annotation file set
: ChromHMM 15-state model for fetal brain male from ENCODE ChIP-seq data. ROADMAP fetal brain male
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855KHX
released
Annotation file set
: Accessible chromatin annotation of kidney podocytes (glomerular visceral epithelial cell) from GSE115961 DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271FEH
released
Annotation file set
: Accessible chromatin annotation of brain fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP