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Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
4
adipocyte
2
ESC derived cell line
2
islet of Langerhans
2
liver
1
CD34-PB
1
GM12878
1
H1-hESC
1
HepG2
1
K562
1
adrenal gland
1
bladder
1
breast - mammary tissue
1
caudate nucleus
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
cervix - ectocervix
1
cervix - endocervix
1
cingulate gyrus
1
colon - sigmoid
1
colon - transverse
1
colonic mucosa
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
fallopian tube
1
fibroblast of lung
1
hepatocyte
1
keratinocyte
1
kidney - cortex
1
kidney - medulla
1
layer of hippocampus
1
lung
1
mammary epithelial cell
1
mid-frontal lobe
1
minor salivary gland
1
mucosa of rectum
1
ovary
1
pancreas
1
pituitary
1
prostate
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
spleen
1
stomach
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
1
testis
1
thyroid
1
uterus
1
vagina
1
whole blood
Date released
1
August, 2017
0
July, 2020
0
March, 2024
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
month_released!
September, 2023
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Download
FileSet
TSTSR295022
released
Annotation file set
: ChromHMM 13-state model for CD34-PB
Lab:
Stephen Parker, UMich
Project:
AMP