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Schema
Citing CMDGA
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Annotation type
3
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
20
endothelial cell of umbilical vein
10
choroid plexus epithelial cell
8
dermis lymphatic vessel endothelial cell
8
fibroblast of pulmonary artery
7
coronary artery
7
pulmonary artery endothelial cell
6
smooth muscle cell of the brain vasculature
5
brain microvascular endothelial cell
5
dermis blood vessel endothelial cell
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
5
lung microvascular endothelial cell
5
smooth muscle cell of the coronary artery
5
tibial artery
4
aortic endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
pancreatic endothelial cell
3
cardiac fibroblast
2
aorta
2
capillary endothelial cell
2
endothelial cell of hepatic sinusoid
2
thoracic aorta
2
vascular associated smooth muscle cell
2
vein endothelial cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aortic smooth muscle cell
1
ascending aorta
1
cardiac fibroblast
1
circle of Willis
1
endothelial cell of coronary artery
1
placental villus capillary endothelial cell
0
CD8-positive, alpha-beta T cell
Organ
5
blood vessel
5
epithelium
5
skin of body
5
vasculature
Life stage
adult
3
newborn
2
postnatal
Date released
3
September, 2022
2
February, 2021
Software used
2
encode-ccres
2
r
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
ovary
relevant_life_stage!
adult
Showing 5 of 5 results
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Download
FileSet
DSR852BJV
released
Annotation file set
: Candidate regulatory elements for BSS00260 dermis blood vessel endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR119FPX
released
Annotation file set
: Target gene predictions for BSS00260 dermis blood vessel endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR734HYX
released
Annotation file set
: Chromatin states for BSS00260 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR039KFO
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE dermis blood vessel endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR190PHH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE dermis blood vessel endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP