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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
Annotation Category
2
Target gene links
Annotation type Category
1
Capture-C
1
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
stem cell
Biosample term
2
CD4-positive, alpha-beta T cell
1
B cell
1
CD8-positive, alpha-beta T cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
HepG2
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
cardiomyocytes (cardiac muscle cell)
erythroblast
1
inflammatory macrophage
1
islet of Langerhans
1
lymphocyte of B lineage (iPSC)
1
macrophage
1
megakaryocyte
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
neutrophil
1
thymus
1
undifferentiated ESC (H9 cell line)
1
white adipose cell
Organ
1
brain
Date released
1
May, 2020
1
September, 2023
Software used
33
macs
7
encode-ccres
3
abc
3
r
2
chicago
1
chromhmm
1
cicero
1
seurat
Lab
1
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
2
AMP
RFA
1
AMP
1
AMP2
biosample_term_name!
erythroblast
Showing 2 of 2 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR603PAJ
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP