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Citing CMDGA
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Annotation type
1
candidate regulatory elements
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
36
A549
12
K562
10
H1-hESC
10
MCF-7
8
EndoC_BH1
6
HeLa-S3
6
endometrium adenocarcinoma
6
immortal human breast epithelial cell line cell
4
22Rv1
4
LNCaP clone FGC
4
NAMALWA cell
4
T47D
2
8988T
2
A673
2
ACC112
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08395 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
AG20443
2
BJ cell
2
C4-2B
2
CMK
2
COLO829
2
CWRU1
2
Caco-2 cell
2
Caki2
2
DND-41
2
DOHH2
2
EH
2
EL
2
ELF-1
2
ELR
2
ES-I3
2
G401
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
GM23248
2
GM23338
2
H4
2
H7-hESC
2
H9
2
HAP-1
2
HCT116
2
HEK293
2
HEK293T
2
HK-2 cell
2
HL-60
2
HPDE6-E6E7
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HTR-8/Svneo
2
HUES48
2
HUES6
2
HUES64
2
HepG2
2
HuH-7
2
HuH-7.5
2
IMR-90
2
KARPAS-422 cell
2
KBM-7
2
KMS-11
2
KOPT-K1
2
L1-S8
2
L1-S8R
2
LHCN-M2
2
LoVo cell
2
Loucy
2
MG63
2
MM.1S
2
NB4
2
NCI-H226 cell
2
NCI-H460 cell
2
NCI-H929
2
NT2-D1 cell
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
PC-9
2
Panc1
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
RWPE2
2
SJCRH30
2
SJSA1
2
SK-MEL-5
2
SU-DHL-6
2
SW480
2
UCSF-4
2
VCaP cell
2
WERI-Rb-1
2
WI38
2
colon carcinoma
2
colon epithelial cell
2
foreskin fibroblast
2
iPS DF 19.11
2
iPS DF 19.7
2
iPS DF 4.7 Cell Line
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
2
iPS-NIHi11
2
iPS-NIHi7
2
lymphocyte
2
renal cell carcinoma
2
urothelium cell line
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
cells - EBV-transformed lymphocytes
1
smooth muscle cell of the coronary artery
Organ
2
extraembryonic component
2
placenta
Life stage
2
embryonic
Date released
2
September, 2022
Software used
4
macs
2
r
1
chromhmm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
brain
Showing 2 of 2 results
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Download
FileSet
DSR476BCI
released
Annotation file set
: Candidate regulatory elements for BSS00714 HTR-8/Svneo from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR847IDI
released
Annotation file set
: Target gene predictions for BSS00714 HTR-8/Svneo from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP