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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
accessible chromatin
2
differential activity
Annotation Category
5
Gene expression levels
2
cis-regulatory elements
Annotation type Category
5
single cell RNA-seq
2
ATAC-seq
Available data
5
tsv
2
bed bed3+
2
bigWig
File set status
7
released
Genome assembly (visualization)
2
hg19
Organism
5
Homo sapiens
Biosample type
7
primary cell
Biosample term
53
common myeloid progenitor, CD34-positive
38
endothelial cell
37
B cell
32
CD4-positive, alpha-beta memory T cell
32
hepatocyte
29
fibroblast
27
macrophage
26
regulatory T cell
23
epithelial cell of proximal tubule
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
pericyte cell
21
T-helper 1 cell
21
glomerular endothelial cell
20
mononuclear cell
20
natural killer cell
20
smooth muscle cell
19
T-helper 17 cell
19
foreskin keratinocyte
17
pancreatic beta cell
17
pancreatic ductal cell
17
trophoblast cell
16
CD14-positive monocyte
16
CD8-positive, alpha-beta T cell
16
astrocyte
16
keratinocyte
16
osteoblast
16
pancreatic alpha cell
16
skeletal muscle myoblast
15
CD4-positive, alpha-beta T cell
15
T-helper 2 cell
15
fibroblast of lung
15
foreskin fibroblast
15
pancreatic delta cell
14
pancreatic acinar cell
13
mammary gland epithelial cell
13
monocyte
13
neurosphere
13
skeletal muscle satellite cell
12
bronchial epithelial cell
12
excitatory neuron
12
fibroblast of cardiac tissue
12
mammary epithelial cell
11
fibroblast of dermis
11
glomerular visceral epithelial cell
10
erythroblast
10
kidney tubule cell
10
neutrophil
10
retinal pigment epithelial cell
9
hepatic stellate cell
9
mature neutrophil
9
naive T cell
9
naive thymus-derived CD4-positive, alpha-beta T cell
9
skeletal muscle fiber
9
skin fibroblast
8
epithelial cell of prostate
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of villous mesenchyme
8
glutamatergic neuron
8
kidney glomerular epithelial cell
8
myoepithelial cell of mammary gland
8
pancreatic stellate cell
8
renal cortical epithelial cell
7
CD1c-positive myeloid dendritic cell
7
kidney epithelial cell
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
luminal epithelial cell of mammary gland
7
memory B cell
7
mesangial cell
7
mesenchymal stem cell
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
alternatively activated macrophage
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cardiac muscle cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
epithelial cell of esophagus
6
foreskin melanocyte
6
naive B cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
plasma cell
6
skeletal muscle cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
basal cell
5
fibroblast of peridontal ligament
5
gabaergic neuron
5
inflammatory macrophage
5
inhibitory neuron
5
iris pigment epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mast cell
5
myofibroblast cell
5
non-pigmented ciliary epithelial cell
5
pancreatic polypeptide-secreting cell
5
tracheal epithelial cell
4
T-cell
4
activated CD4-positive, alpha-beta T cell
4
acute myeloid leukemia cell
4
adipocyte
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
astrocyte of the spinal cord
4
blood vessel smooth muscle cell
4
enteric smooth muscle cell
4
fibroblast of gingiva
4
fibroblast of the conjunctiva
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
leukocyte
4
megakaryocyte
4
mesothelial cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
preadipocyte
4
renal epithelial cell
4
smooth muscle cell of the esophagus
4
stromal cell of bone marrow
4
type I pneumocyte
3
CD4-positive helper T cell
3
Cycling Mononuclear Phagocyte
3
Ishikawa
3
Mast Cell
3
S-shaped body
3
T follicular helper cell
3
Th1 cell
3
Th17 cell
3
activated CD8-positive, alpha-beta T cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
blood cell
3
bone marrow cell
3
brain pericyte
3
cardiac fibroblast
3
central memory CD8-positive, alpha-beta T cell
3
ciliated cell
3
club cell
3
effector memory CD8-positive, alpha-beta T cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Life stage
5
adult
Date released
5
September, 2023
2
May, 2020
May, 2021
Software used
3
r
2
deseq2
Lab
5
KPMP
2
AMP-T2D consortium
Project
5
KPMP
2
AMP
RFA
5
KPMP
2
AMP
month_released!
May, 2021
organ_slims!
vasculature
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR989PUJ
released
Annotation file set
: Differential activity annotation of Connecting Tubule Intercalated Cell Type A between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR687OTH
released
Annotation file set
: Differential activity annotation of Connecting Tubule Intercalated Cell Type A between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR229SRB
released
Annotation file set
: Gene expression annotation of Connecting Tubule Intercalated Cell Type A of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR873QAP
released
Annotation file set
: Gene expression annotation of Connecting Tubule Intercalated Cell Type A of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR176YVS
released
Annotation file set
: Gene expression annotation of Connecting Tubule Intercalated Cell Type A of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR507SPZ
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal effector CD4-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR399KPT
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated effector CD4-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP