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Citing CMDGA
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Annotation type
2
target gene predictions
Annotation Category
2
Target gene links
Annotation type Category
2
HiC
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Biosample term
2
cardiomyocytes (cardiac muscle cell)
2
psoas muscle
1
EndoC_BH1
1
aorta
1
cardiac precursors (cardiac muscle cell)
1
endothelial cell of umbilical vein
1
heart
1
heart left ventricle
1
heart right ventricle
1
liver
1
lymphocyte of B lineage (iPSC)
1
pancreas
Organ
1
blood vessel
1
epithelium
1
pancreas
1
vasculature
Life stage
1
adult
Date released
2
March, 2020
Software used
20
macs
13
r
6
deseq2
6
samtools
4
chromhmm
2
encode-ccres
2
hiccups
1
deltasvm
1
nospecificsoft_customcode
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
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FileSet
DSR373FUA
released
Annotation file set
: A target gene prediction annotation in EndoC_BH1 of DSR433ZII Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR428FCH
released
Annotation file set
: A target gene prediction annotation in aorta of DSR073ZJB Hi-C
Lab:
AMP-T2D consortium
Project:
AMP