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Citing CMDGA
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Annotation type
3
variant allelic effects
Annotation Category
3
Genetic variant effects
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
14
endothelial cell of hepatic sinusoid
11
hepatocyte
7
pancreatic ductal cell
5
endothelial cell
3
enterocyte
3
hepatocyte(AFP)
3
pancreatic acinar cell
2
epithelial cell of esophagus
2
goblet cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
1
bronchial goblet cell
1
cortical cell of adrenal gland
1
granulosa cell
1
keratinocyte
1
luminal epithelial cell of prostatic duct
1
mammary gland epithelial cell
1
mesothelial cell
1
nephron tubule
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic alpha cell
1
pancreatic endothelial cell
1
parietal cell
1
peptic cell
1
pigmented layer of retina
1
thyroid follicular cell
1
type B pancreatic cell
1
type II pneumocyte
Organ
3
epithelium
3
intestine
Date released
9
May, 2021
3
February, 2024
3
November, 2021
2
March, 2023
1
February, 2023
1
March, 2020
1
May, 2020
1
November, 2019
Software used
3
deltasvm
Lab
3
Bing Ren, UCSD
Project
3
AMP
RFA
3
AMP
software_used.software.name!
samtools
Showing 3 of 3 results
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Download
FileSet
DSR972LVJ
released
Annotation file set
: Variant allelic effects annotation of Enterocytes (sub-type3) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR623GGP
released
Annotation file set
: Variant allelic effects annotation of Enterocytes (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR654PGN
released
Annotation file set
: Variant allelic effects annotation of Enterocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP