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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
caQTL
1
differential activity
Annotation Category
1
Gene expression levels
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
RNA-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
1
tsv
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
2
cell line
1
primary cell
Biosample term
14
retina
10
pigmented layer of retina
3
coronary artery
2
EndoC_BH1
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
1
brain
1
endothelial cell
1
fibroblast of the aortic adventitia
1
heart
1
islet of Langerhans
1
liver
1
macrophage
1
purified protein and synthetic DNA oligo binding assay
1
right atrium auricular region
1
smooth muscle cell of the coronary artery
1
spleen
1
thoracic aorta
1
tibial artery
1
tibial nerve
Organ
2
epithelium
2
pancreas
1
artery
1
blood vessel
1
heart
1
vasculature
Date released
16
May, 2021
6
February, 2021
2
February, 2023
2
March, 2023
1
February, 2020
1
March, 2020
1
May, 2020
1
November, 2019
Software used
1
macs
1
rasqual
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
SK-N-SH
Showing 3 of 3 results
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Download
FileSet
DSR309JFA
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siCALCOCO2 mediated knockdown
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR986YKL
released
Annotation file set
: Accessible chromatin annotation of EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP