Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
HiC
Available data
2
bed bed3+
1
bed bed9
1
bigBed bed9
File set status
2
released
1
revoked
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
4
nephron progenitor
3
S-shaped body
3
brain
3
heart
3
kidney
3
kidney interstitial cell
2
endothelial cell of hepatic sinusoid
2
renal vesicle
1
cardiac fibroblast
1
hindlimb muscle
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
endothelial cell
1
epithelial cell of distal tubule
1
fetal heart
1
forelimb muscle
1
glomerular visceral epithelial cell
1
heart left ventricle
1
heart right ventricle
1
hepatoblast
1
kidney capillary endothelial cell
1
left cardiac atrium
1
left renal pelvis
1
leukocyte
1
mesangial cell
1
meso-epithelial cell
1
muscle of arm
1
muscle of leg
1
proximal tubule
1
renal connecting tubule
1
renal cortex interstitium
1
renal pelvis
1
retina
1
right renal pelvis
1
ureteric bud
Organ
3
heart
Life stage
124
embryonic
32
adult
7
child
3
fetal
2
young adult
Date released
2
May, 2020
February, 2020
1
March, 2020
Software used
1
chromhmm
1
deltasvm
1
hiccups
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
February, 2020
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR480PRT
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart child DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR771SNY
released
Annotation file set
: A target gene prediction annotation in heart of DSR786VPZ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR032VAF
revoked
Annotation file set
: ChromHMM 5-state model for heart fetal from 5 GSE63634 ChIP-seq data (very large promoter regions, revoked)
Lab:
AMP-T2D consortium
Project:
AMP