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Schema
Citing CMDGA
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Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
cell line
1
stem cell
Biosample term
115
monocyte
49
heart
48
CD8-positive, alpha-beta T cell
47
stomach
46
kidney
40
brain
35
lung
35
muscle of arm
34
endothelial cell
34
fibroblast
33
adrenal gland
33
liver
33
retina
33
small intestine
32
islet of Langerhans
32
muscle of leg
32
neural progenitor cell
32
placenta
30
large intestine
29
B cell
macrophage
28
common myeloid progenitor, CD34-positive
28
muscle of back
26
hepatocyte
26
left lung
26
thymus
23
CD14-positive monocyte
23
adipocyte
23
heart left ventricle
23
right lung
23
smooth muscle cell
22
hematopoietic multipotent progenitor cell
22
pericyte cell
22
renal cortex interstitium
22
renal pelvis
22
right kidney
21
spleen
20
pigmented layer of retina
18
left kidney
18
natural killer cell
18
pancreas
17
adipose tissue
17
spinal cord
17
tibial nerve
16
coronary artery
16
endothelial cell of hepatic sinusoid
16
endothelial cell of umbilical vein
16
subcutaneous adipose tissue
15
CD4-positive, alpha-beta T cell
15
T cell
15
caudate nucleus
15
pancreatic ductal cell
14
CD4-positive, alpha-beta memory T cell
14
astrocyte
14
body of pancreas
14
embryonic stem cell
14
foreskin fibroblast
14
foreskin keratinocyte
14
mesenchymal stem cell
14
regulatory T cell
14
retinal pigment epithelial cell
14
tibial artery
13
excitatory neuron
13
keratinocyte
13
mammary epithelial cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
osteoblast
12
cardiac muscle cell
12
heart right ventricle
12
neuronal stem cell
12
omental fat pad
12
ovary
12
pancreatic beta cell
12
putamen
12
right atrium auricular region
12
skeletal muscle myoblast
12
substantia nigra
12
trophoblast cell
11
ascending aorta
11
erythroblast
11
neutrophil
11
pancreatic acinar cell
11
psoas muscle
11
sigmoid colon
10
T-helper 1 cell
10
cerebellum
10
fibroblast of lung
10
frontal cortex
10
gastrocnemius medialis
10
layer of hippocampus
10
mammary gland epithelial cell
10
pancreatic alpha cell
10
pancreatic delta cell
10
prostate gland
10
testis
10
thyroid gland
9
Ammon's horn
9
left cardiac atrium
9
mature neutrophil
9
muscle of trunk
9
skeletal muscle satellite cell
9
transverse colon
9
upper lobe of left lung
8
CD8-positive, alpha-beta memory T cell
8
Peyer's patch
8
T-cell acute lymphoblastic leukemia
8
T-helper 17 cell
8
T-helper 2 cell
8
aorta
8
bronchial epithelial cell
8
chorionic villus
8
glutamatergic neuron
8
left renal cortex interstitium
8
left renal pelvis
8
mast cell
8
mononuclear cell
8
neuroblastoma cell line
8
skeletal muscle tissue
7
CD4-positive helper T cell
7
breast epithelium
7
dendritic cell
7
endocrine pancreas
7
endothelial cell of lymphatic vessel
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
foreskin melanocyte
7
hepatic stellate cell
7
mesendoderm
7
right renal cortex interstitium
7
temporal lobe
6
T-cell
6
amygdala
6
angular gyrus
6
colon epithelial cell
6
colonic mucosa
6
cortical cell of adrenal gland
6
dermis blood vessel endothelial cell
6
enterocyte
6
esophagus
6
fibroblast of cardiac tissue
6
fibroblast of dermis
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
fibroblast of villous mesenchyme
6
globus pallidus
6
hypothalamus
6
lower leg skin
6
memory B cell
6
midbrain
6
myofibroblast cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neurosphere
6
nucleus accumbens
6
right lobe of liver
6
right renal pelvis
6
skeletal muscle fiber
6
trophoblast
6
uterus
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
CD1c-positive myeloid dendritic cell
5
SGBS preadipocytes
5
Th1 cell
5
alternatively activated macrophage
5
anterior cingulate cortex
5
basal cell
5
cartilage tissue
5
cerebellum (Hemisphere)
5
chondrocyte
5
choroid plexus epithelial cell
5
cingulate gyrus
5
duodenal mucosa
5
endocardial cell
5
epithelial cell of prostate
5
epithelial cell of proximal tubule
5
eye
5
gabaergic neuron
5
gastroesophageal sphincter
5
glomerular endothelial cell
5
inhibitory neuron
5
kidney glomerular epithelial cell
5
kidney tubule cell
5
luminal epithelial cell of mammary gland
5
mesodermal cell
5
mucosa of rectum
5
myotube
5
naive B cell
5
occipital lobe
5
olfactory receptor cell
5
pancreatic stellate cell
5
parathyroid adenoma
5
peripheral blood mononuclear cell
5
plasma cell
5
renal cortical epithelial cell
5
skin fibroblast
5
thoracic aorta
5
tongue
5
type I muscle cell
4
C1 segment of cervical spinal cord
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
Organ
1
embryo
Life stage
1
embryonic
Date released
1
August, 2017
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
biosample_term_name!
macrophage
biosample_type!
cell line
software_used.software.name!
r
Showing 1 of 1 results
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Download
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP