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Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
cell line
1
stem cell
Biosample term
130
monocyte
90
heart
86
stomach
81
kidney
73
brain
68
lung
67
muscle of arm
63
small intestine
62
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
51
CD8-positive, alpha-beta T cell
49
liver
48
thymus
47
B cell
47
neural progenitor cell
45
islet of Langerhans
45
right lung
44
endothelial cell
43
hematopoietic multipotent progenitor cell
42
right kidney
40
renal cortex interstitium
40
renal pelvis
40
retina
38
hepatocyte
36
left kidney
34
fibroblast
34
heart left ventricle
34
spleen
32
CD4-positive, alpha-beta memory T cell
32
adipose tissue
31
CD14-positive monocyte
31
macrophage
31
spinal cord
29
adipocyte
28
regulatory T cell
27
smooth muscle cell
26
natural killer cell
25
tibial nerve
24
body of pancreas
24
pancreatic ductal cell
24
pericyte cell
23
T cell
23
T-helper 1 cell
23
epithelial cell of proximal tubule
23
sigmoid colon
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
caudate nucleus
22
foreskin keratinocyte
22
pancreas
21
T-helper 17 cell
21
coronary artery
21
glomerular endothelial cell
21
subcutaneous adipose tissue
20
endothelial cell of umbilical vein
20
mononuclear cell
20
ovary
20
pigmented layer of retina
20
psoas muscle
19
heart right ventricle
19
mesenchymal stem cell
19
right atrium auricular region
18
gastrocnemius medialis
18
pancreatic beta cell
18
substantia nigra
18
thyroid gland
18
tibial artery
18
transverse colon
17
T-helper 2 cell
17
astrocyte
17
muscle of trunk
17
omental fat pad
17
osteoblast
17
pancreatic alpha cell
17
testis
16
ascending aorta
16
cerebellum
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
16
foreskin fibroblast
16
frontal cortex
16
keratinocyte
16
layer of hippocampus
16
retinal pigment epithelial cell
16
skeletal muscle myoblast
16
skeletal muscle tissue
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
embryonic stem cell
15
mammary gland epithelial cell
15
neutrophil
15
pancreatic acinar cell
15
pancreatic delta cell
14
Peyer's patch
14
cardiac muscle cell
14
endocrine pancreas
14
excitatory neuron
14
prostate gland
14
putamen
13
aorta
13
neurosphere
13
skeletal muscle satellite cell
13
temporal lobe
12
Ammon's horn
12
bronchial epithelial cell
12
fibroblast of cardiac tissue
12
fibroblast of dermis
12
left renal cortex interstitium
12
mammary epithelial cell
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neuronal stem cell
11
breast epithelium
11
cardiomyocytes
11
erythroblast
11
esophagus muscularis mucosa
11
left cardiac atrium
left renal pelvis
11
right renal pelvis
10
angular gyrus
10
chorion membrane
10
colonic mucosa
10
dermis blood vessel endothelial cell
10
esophagus squamous epithelium
10
glomerular visceral epithelial cell
10
hepatic stellate cell
10
kidney tubule cell
10
pancreatic stellate cell
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
cingulate gyrus
9
duodenal mucosa
9
esophagus
9
foreskin melanocyte
9
parathyroid adenoma
9
skin fibroblast
9
tongue
9
vagina
8
T-cell acute lymphoblastic leukemia
8
cardiomyocytes (cardiac muscle cell)
8
dendritic cell
8
endodermal cell
8
epithelial cell of prostate
8
extended pluripotent stem (EPS) cells
8
eye
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
globus pallidus
8
induced pluripotent stem cell
8
limb
8
lower leg skin
8
mast cell
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
progenitor cell of endocrine pancreas
8
skeletal muscle fiber
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
amygdala
7
choroid plexus epithelial cell
7
fibroblast of villous mesenchyme
7
hypothalamus
7
kidney glomerular epithelial cell
7
mature neutrophil
7
memory B cell
7
renal cortical epithelial cell
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
T-cell
6
alternatively activated macrophage
6
anterior cingulate cortex
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
bipolar neuron
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dermis lymphatic vessel endothelial cell
6
endothelial cell of lymphatic vessel
6
enterocyte
6
gamma-delta T cell
6
glutamatergic neuron
6
midbrain
6
middle frontal gyrus
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
nucleus accumbens
6
occipital lobe
Organ
1
embryo
Life stage
1
embryonic
Date released
1
August, 2017
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
biosample_term_name!
left renal pelvis
biosample_type!
cell line
Showing 1 of 1 results
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Download
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP