Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
55
A549
19
K562
16
MCF-7
10
HeLa-S3
9
endometrium adenocarcinoma
9
immortal human breast epithelial cell line cell
8
HepG2
7
SK-N-SH
6
22Rv1
6
LNCaP clone FGC
6
NAMALWA cell
6
SK-N-DZ
6
T47D
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
BE(2)-C
4
BJ cell
4
Caco-2 cell
4
GM06990
4
GM08714
4
GM12864
4
GM12865
4
GM12875
4
GM12878
4
GM12891
4
GM12892
4
GM19238
4
GM19239
4
GM19240
4
H1-hESC
4
HEK293
4
HL-60
4
IMR-90
4
NB4
4
NT2-D1 cell
4
SK-N-MC
4
WERI-Rb-1
3
8988T
3
A172
3
A673
3
ACC112
3
ACHN
3
AG08395 cell
3
AG08396 cell
3
AG20443
3
C4-2B
3
CMK
3
COLO829
3
CWRU1
3
Caki2
3
DND-41
3
DOHH2
3
Daoy
3
EH
3
EL
3
ELF-1
3
ELR
3
ES-I3
3
G401
3
GM03348
3
GM04503
3
GM04504
3
GM10248
3
GM10266
3
GM18507
3
GM23248
3
GM23338
3
H4
3
H54
3
H7-hESC
3
H9
3
HAP-1
3
HCT116
3
HEK293T
3
HK-2 cell
3
HPDE6-E6E7
3
HS-27A
3
HS-5
3
HT-29
3
HT1080
3
HTR-8/Svneo
3
HUES48
3
HUES6
3
HUES64
3
HuH-7
3
HuH-7.5
3
KARPAS-422 cell
3
KBM-7
3
KMS-11
3
KOPT-K1
3
L1-S8
3
L1-S8R
3
LHCN-M2
3
LoVo cell
3
Loucy
3
M059J
3
MG63
3
MM.1S
3
NCI-H226 cell
3
NCI-H460 cell
3
NCI-H929
3
OCI-LY1
3
OCI-LY3
3
OCI-LY7
3
PC-3
3
PC-9
3
Panc1
3
RCC 7860
3
RPMI7951
3
RPMI8226
3
RWPE1
3
RWPE2
3
SJCRH30
3
SJSA1
3
SK-MEL-5
3
SU-DHL-6
3
SW480
3
UCSF-4
3
VCaP cell
3
WI38
3
colon carcinoma
3
colon epithelial cell
3
foreskin fibroblast
3
iPS DF 19.11
3
iPS DF 19.7
3
iPS DF 4.7 Cell Line
3
iPS DF 6.9
3
iPS-11a
3
iPS-15b
3
iPS-18a
3
iPS-18c
3
iPS-20b
3
iPS-NIHi11
3
iPS-NIHi7
3
lymphocyte
3
medulloblastoma
3
renal cell carcinoma
3
urothelium cell line
2
MIN6
1
DND-41 cell
1
ECC-1
1
GM10847
1
GM12801
1
GM12872
1
GM12873
1
GM12874
1
GM15510
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
HAC cell
1
HBMEC cell
1
HCT-116 cell
1
HEK293-T-REx cell
1
HFF-Myc
1
HGPS cell
1
MCF10A-Er-Src cell
1
NHEK
1
Normal Human Astrocytes
1
PANC-1 cell
1
PFSK-1 cell
1
Raji cell
1
SAEC
1
SH-SY5Y cell
1
SK-N-SH_RA
1
T-47D cell
1
U-87 MG
1
U2OS
1
WI-38 cell
1
esophageal epithelial cell
1
glioblastoma cell
1
leukemic stem cell
1
spinal cord
Organ
4
embryo
Life stage
3
embryonic
Date released
37
February, 2024
8
August, 2021
3
September, 2022
2
February, 2021
1
June, 2020
1
May, 2021
1
October, 2022
Software used
2
chromhmm
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
artery
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR876GWY
released
Annotation file set
: Binding sites annotation for H1-hESC (H1-hESC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR748AAQ
released
Annotation file set
: Target gene predictions for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP