Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
44
H1-hESC
16
coronary artery
16
endothelial cell of hepatic sinusoid
16
endothelial cell of umbilical vein
14
H9
14
tibial artery
13
trophoblast cell
11
ascending aorta
8
aorta
8
chorionic villus
7
thoracic aorta
7
trophoblast
6
HUES8
6
dermis blood vessel endothelial cell
6
endodermal cell
6
fibroblast of pulmonary artery
6
mesodermal cell
5
CyT49
5
pulmonary artery endothelial cell
5
smooth muscle cell of the coronary artery
4
H7-hESC
4
HUES6
4
aortic endothelial cell
4
urinary bladder
3
H4
3
HUES64
3
brain microvascular endothelial cell
3
ectodermal cell
3
fibroblast of the aortic adventitia
3
hESC H9
3
kidney capillary endothelial cell
3
primordial germ cell
2
Afferent / Efferent Arteriole Endothelial Cell
2
Degenerative Peritubular Capillary Endothelial Cell
2
ELF-1
2
Glomerular Capillary Endothelial Cell
2
HUES48
2
Peritubular Capillary Endothelial Cell
2
UCSF-4
2
capillary endothelial cell
2
embryonic facial prominence
2
first pancreatic bud
2
vein endothelial cell
1
brain microvascular endothelial cell
1
ES-I3
1
H1
1
H7
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
bladder (urinary bladder)
1
cardiac mesoderm primordium
1
cardiogenic mesoderm
1
circle of Willis
1
embryonic fibroblast
1
endothelial cell of coronary artery
1
morula
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
trophoblast giant cell
Organ
4
embryo
0
blood vessel
0
urinary bladder
Life stage
1
embryonic
Date released
1
February, 2021
1
June, 2020
1
May, 2021
1
September, 2022
Software used
2
macs
r
1
abc
1
chromhmm
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
software_used.software.name!
r
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR803QHX
released
Annotation file set
: Chromatin states for BSS00483 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157MZQ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR486DHW
released
Annotation file set
: enhancer-gene predicton of H7 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR227UQF
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP