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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
gene expression
2
target gene predictions
Annotation Category
2
Gene expression levels
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
RNA-seq
1
snRNA-seq
Available data
4
bed bed3+
1
tsv
File set status
6
released
Genome assembly (visualization)
5
hg19
Organism
6
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
primary cell
Biosample term
15
adipose tissue
6
adipocyte
6
fibroblast of cardiac tissue
6
fibroblast of dermis
6
fibroblast of lung
6
omental fat pad
5
mesangial cell
5
mesenchymal stem cell
5
pancreatic stellate cell
5
subcutaneous adipose tissue
4
bone tissue
4
foreskin fibroblast
4
osteoblast
4
skin fibroblast
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Fibroblast
3
Mesangial Cell
3
adult endothelial progenitor cell
3
hepatic stellate cell
3
pancreatic quiescent stellate cell
2
GM23248
2
HT1080
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
pericyte cell
2
stromal cell of bone marrow
2
visceral abdominal adipose tissue
1
activated pancreatic stellate cell
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
Organ
6
connective tissue
2
embryo
Life stage
3
adult
2
unknown
Date released
4
September, 2022
1
February, 2021
1
February, 2024
Software used
8
macs
6
chromhmm
6
r
4
abc
2
encode-ccres
1
deeptools
1
deltasvm
1
samtools
1
umitools
Lab
5
AMP-T2D consortium
1
Stephen Parker, UMich
Project
6
AMP
RFA
5
AMP
1
AMP2
biosample_term_name!
NAMALWA cell
Showing 6 of 6 results
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Download
FileSet
DSR611GAA
released
Annotation file set
: Candidate regulatory elements for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR854ZLT
released
Annotation file set
: Candidate regulatory elements for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR339QKV
released
Annotation file set
: Target gene predictions for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619LYX
released
Annotation file set
: Target gene predictions for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR356IFR
released
Annotation file set
: Gene expression annotation of adipocyte from abdominal and gluteo-femoral preadipocytes of GSE118500 for GSE118497
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP