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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
23
K562
13
GM12878
6
peripheral blood mononuclear cell
5
GM06990
5
GM19240
5
HAP-1
5
HL-60
5
OCI-LY7
4
CMK
4
GM12873
4
GM12875
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
RPMI8226
3
GM10847
3
GM12872
3
GM12891
3
GM12892
3
GM18526
3
GM18951
3
KBM-7
3
peripheral blood stem cell
2
NAMALWA
2
NAMALWA cell
2
NB4
2
SUDHL6
2
blood
1
DOHH2
1
GM12874
1
Karpas-422
1
SU-DHL-6
1
cerebrospinal fluid
1
whole blood
Organ
33
heart
12
adipose tissue
12
connective tissue
5
blood
5
bodily fluid
Life stage
1
adult
Date released
3
February, 2021
September, 2022
1
June, 2020
1
May, 2021
Software used
3
macs
1
abc
1
encode-ccres
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
month_released!
September, 2022
Showing 5 of 5 results
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Download
FileSet
DSR930MDC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HAP-1
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR956RSG
released
Annotation file set
: Histone modifications annotation for Blood HAP1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR497ETD
released
Annotation file set
: Binding sites annotation for Blood HAP1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR155AOX
released
Annotation file set
: enhancer-gene predicton of HAP1 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR934MXE
released
Annotation file set
: Accessible chromatin annotation for Blood HAP1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP