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Citing CMDGA
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Annotation type
2
target gene predictions
Annotation Category
2
Target gene links
Annotation type Category
2
HiC
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
60
placenta
56
large intestine
55
small intestine
23
trophoblast cell
16
chorionic villus
10
chorion membrane
9
colon epithelial cell
8
fibroblast of villous mesenchyme
7
sigmoid colon
6
enterocyte
6
umbilical cord
4
HCT-116 cell
4
HT-29
4
RKO
4
amnion
4
enteric smooth muscle cell
3
HTR-8/Svneo
3
SW480
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
epithelial cell of amnion
3
transverse colon
2
HCT116
2
chorion
2
colonic mucosa
2
enterocyte of epithelium of small intestine
2
paneth cell
2
small intestine goblet cell
1
Crypt of Lieberkuhn
1
Peyer's patch
1
amniotic epithelial cell
1
colon
1
colon sigmoid
1
crypt of Lieberkuhn
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
duodenal mucosa
1
intestinal epithelial cell
1
intestinal epithelium
1
mucosa of rectum
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
rectum smooth muscle tissue
1
trophoblast giant cell
Organ
2
intestine
2
large intestine
0
extraembryonic component
Life stage
adult
Date released
2
February, 2024
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
eye
relevant_life_stage!
adult
Showing 2 of 2 results
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Download
FileSet
DSR311TAK
released
Annotation file set
: Target gene predictions from Hi-C on HCT116. wild-type
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR162XYA
released
Annotation file set
: Target gene predictions from Hi-C on HCT116. WAPL KD
Lab:
AMP-T2D consortium
Project:
AMP