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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
55
kidney
47
adrenal gland
32
right kidney
29
renal cortex interstitium
29
renal pelvis
27
left kidney
8
epithelial cell of proximal tubule
8
kidney tubule cell
8
left renal cortex interstitium
8
left renal pelvis
8
right renal cortex interstitium
8
right renal pelvis
7
glomerular endothelial cell
7
glomerular visceral epithelial cell
6
cortical cell of adrenal gland
6
kidney epithelial cell
6
kidney glomerular epithelial cell
6
renal cortical epithelial cell
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Connecting Tubule Cell
5
Cortical Thick Ascending Limb Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Medullary Thick Ascending Limb Cell
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Renin-positive Juxtaglomerular Granular Cell
5
kidney capillary endothelial cell
4
HEK293
3
ACHN
3
Caki2
3
G401
3
HEK293T
3
RCC 7860
3
renal cell carcinoma
2
kidney distal convoluted tubule epithelial cell
2
metanephros
2
renal principal cell
2
type I cell of adrenal cortex
2
type II cell of adrenal cortex
1
left kidney
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
chromaffin cell of adrenal gland
1
cortex of kidney
1
kidney - cortex
1
kidney - medulla
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
nephron tubule
1
parietal epithelial cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal glomerulus
1
renal intercalated cell
1
ureteric bud
Organ
3
kidney
0
adrenal gland
Life stage
3
embryonic
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
February, 2021
June, 2020
Showing 3 of 3 results
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Download
FileSet
DSR343FCZ
released
Annotation file set
: Candidate regulatory elements for BSS00528 HEK293T from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR328BYR
released
Annotation file set
: Target gene predictions for BSS00528 HEK293T from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR654ZIM
released
Annotation file set
: Chromatin states for BSS00528 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP