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Getting started
Schema
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
1611
whole blood
82
monocyte
67
heart
67
stomach
57
brain
57
fibroblast
56
endothelial cell
56
placenta
55
kidney
53
adrenal gland
53
head of caudate nucleus
52
muscle of arm
49
A549
48
CD8-positive, alpha-beta T cell
48
lung
47
T-cell
47
muscle of back
46
muscle of leg
45
common myeloid progenitor, CD34-positive
44
B cell
44
small intestine
40
HeLa-S3
39
macrophage
38
CD4-positive, alpha-beta T cell
38
large intestine
38
smooth muscle cell
38
thymus
37
T cell
34
renal pelvis
34
right lung
32
renal cortex interstitium
31
H1-hESC
31
left lung
31
natural killer cell
31
neural progenitor cell
30
islet of Langerhans
30
right kidney
29
hematopoietic multipotent progenitor cell
28
K562
28
adipocyte
28
dorsolateral prefrontal cortex
28
hepatocyte
28
retina
28
stimulated activated CD4-positive, alpha-beta T cell
27
cardiac muscle cell
27
liver
26
heart left ventricle
26
posterior cingulate gyrus
25
spinal cord
24
keratinocyte
24
pericyte
23
T-helper 1 cell
22
astrocyte
21
CD14-positive monocyte
21
coronary artery
21
glutamatergic neuron
21
left kidney
21
ovary
20
CD4-positive, alpha-beta memory T cell
20
heart right ventricle
19
MCF-7
19
activated CD4-positive, alpha-beta T cell
19
body of pancreas
19
pancreatic ductal cell
19
spleen
18
psoas muscle
17
T-helper 17 cell
17
adipose tissue
17
foreskin keratinocyte
17
pancreas
16
H9
16
T-helper 2 cell
16
sigmoid colon
16
stimulated activated CD8-positive, alpha-beta memory T cell
16
tibial nerve
15
dendritic cell
15
endothelial cell of umbilical vein
15
fibroblast of lung
14
CD8-positive, alpha-beta memory T cell
14
HCT116
14
gastrocnemius medialis
14
naive thymus-derived CD4-positive, alpha-beta T cell
14
regulatory T cell
14
subcutaneous adipose tissue
14
tibial artery
14
trophoblast cell
13
GM12878
13
ascending aorta
13
cerebellum
13
glomerular endothelial cell
13
induced pluripotent stem cell
13
pancreatic acinar cell
13
pancreatic delta cell
13
pericyte cell
13
upper lobe of left lung
12
Peyer's patch
12
epithelial cell of proximal tubule
12
erythroblast
12
hepatic stellate cell
12
mammary epithelial cell
12
mononuclear cell
12
pigmented layer of retina
12
thyroid gland
11
HepG2
11
activated T-cell
11
caudate nucleus
11
endocardial cell
11
foreskin fibroblast
11
testis
10
Ammon's horn
10
EndoC_BH1
10
chorionic villus
10
colonic mucosa
10
embryonic stem cell
10
endodermal cell
10
endothelial cell of hepatic sinusoid
10
esophagus squamous epithelium
10
frontal cortex
10
left cardiac atrium
10
lymphoblastoid cell line
10
mesenchymal stem cell
10
osteoblast
10
pancreatic alpha cell
10
prostate gland
10
right atrium auricular region
9
22Rv1
9
GABAergic neuron
9
PC-9
9
SK-N-SH
9
breast cancer cell
9
bronchial epithelial cell
9
diffuse intrinsic pontine glioma
9
esophagus muscularis mucosa
9
fibroblast of cardiac tissue
9
glomerular visceral epithelial cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
neuronal stem cell
9
omental fat pad
9
tongue
8
LNCaP clone FGC
8
Rhabdomyosarcoma
8
activated CD8-positive, alpha-beta memory T cell
8
dermis blood vessel endothelial cell
8
excitatory neuron
8
fibroblast cell line
8
foreskin melanocyte
8
gastric cancer cell
8
muscle of trunk
8
naive B cell
8
neuron
8
pituitary stalk
8
right renal pelvis
8
skin fibroblast
7
GM03348
7
SJCRH30
7
SK-N-MC
7
WI38
7
cell of skeletal muscle
7
chorion membrane
7
choroid plexus epithelial cell
7
endocrine pancreas
7
endothelial cell of lymphatic vessel
7
esophagus
7
limb
7
pancreatic beta cell
7
skeletal muscle satellite cell
7
skeletal muscle tissue
7
urinary bladder
6
B Cell
6
GM04503
6
GM12864
6
HFFc6
6
KARPAS-422 cell
6
SJSA1
6
SK-N-DZ
6
WERI-Rb-1
6
anterior cingulate cortex
6
breast epithelium
6
cardiac precursors (cardiac muscle cell)
6
colon epithelial cell
6
duodenal mucosa
6
epithelial cell of prostate
6
fibroblast of pulmonary artery
6
fibroblast of villous mesenchyme
6
kidney glomerular epithelial cell
6
layer of hippocampus
6
mast cell
6
mesendoderm
6
naive T cell
6
neurosphere
6
smooth muscle cell of the coronary artery
6
substantia nigra
6
uterus
5
A172
5
ACHN
5
AG04449 cell
5
B-lymphoblastoid cell line
5
GM19240
5
HT-29
5
IMR-90
Organ
5
intestine
5
large intestine
Life stage
3
adult
Date released
2
February, 2021
2
September, 2022
1
June, 2020
Software used
2
macs
1
chromhmm
1
encode-ccres
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
Collection Tags
2
ChIP-Atlas
2
EpiMap
1
ENCODE
RFA
5
AMP
biosample_term_name!
Mesangial Cell
Showing 5 of 5 results
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Download
FileSet
DSR691VDL
released
Annotation file set
: Candidate regulatory elements for BSS00708 HT-29 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895ABN
released
Annotation file set
: Chromatin states for BSS00708 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR760JIZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HT-29
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR168GZG
released
Annotation file set
: Binding sites annotation for Digestive tract HT-29 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR208YEV
released
Annotation file set
: Accessible chromatin annotation for Digestive tract HT-29 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP