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Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
15
large intestine
8
MCF-7
6
mammary epithelial cell
5
sigmoid colon
4
transverse colon
3
HT-29
3
MCF 10A
3
RKO
3
SW480
3
colonic mucosa
3
fibroblast of mammary gland
3
mammary gland epithelial cell
2
mammary gland
2
mucosa of rectum
2
muscle layer of colon
2
myoepithelial cell of mammary gland
1
Caco-2
1
HCT-116 cell
1
HCT116
1
LoVo
1
T47D
1
colon
1
rectal smooth muscle tissue
Organ
3
intestine
3
large intestine
0
mammary gland
Life stage
1
adult
Date released
3
February, 2021
3
September, 2022
1
June, 2020
1
May, 2021
Software used
2
macs
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
spinal cord
Showing 3 of 3 results
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Download
FileSet
DSR760JIZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HT-29
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR582VBD
released
Annotation file set
: Histone modifications annotation for Digestive tract HT-29 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR168GZG
released
Annotation file set
: Binding sites annotation for Digestive tract HT-29 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP