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Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
62
HeLa-S3
59
A549
53
H1-hESC
40
K562
23
EndoC_BH1
22
MCF-7
20
breast cancer cell
19
HFFc6
16
HepG2
15
GM12878
12
lymphoblastoid cell line
12
neuroblastoma cell
11
gastric cancer cell
10
H9
10
Rhabdomyosarcoma
10
lymphocyte
10
pituitary stalk
NAMALWA cell
9
endometrium adenocarcinoma
9
fibroblast cell line
9
immortal human breast epithelial cell line cell
9
liposarcoma
8
22Rv1
8
B-lymphoblastoid cell line
8
GM19240
8
IMR-90
8
KARPAS-422 cell
8
SK-N-DZ
8
SK-N-SH
8
diffuse intrinsic pontine glioma
8
induced pluripotent stem cell
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
Caco-2 cell
7
GM06990
7
GM12864
7
GM12865
7
GM19238
7
GM19239
7
HAP-1
7
HL-60
7
HT-29
7
Jurkat
7
LoVo cell
7
MM.1S
7
NT2-D1 cell
7
OCI-LY7
7
PC-9
7
SK-N-MC
7
WERI-Rb-1
7
iPSC derived cell line
7
melanoma
6
CMK
6
GM12875
6
GM12891
6
GM12892
6
GM18507
6
GM23248
6
H7-hESC
6
HUES8
6
HuH-7
6
LHCN-M2
6
LNCaP clone FGC
6
MG63
6
PC-3
6
RPMI8226
6
RWPE1
6
Rh-4 cell
6
SW480
6
T47D
6
acute myeloid leukemia
6
glioblastoma multiforme cancer stem cell
6
hESC cell
6
prostate cancer cell line
6
squamous cell lung carcinoma
5
Chondroid Chordoma
5
CyT49
5
Daoy
5
Ewing sarcoma
5
GM08714
5
GM10248
5
GM10266
5
HCT-116 cell
5
HCT116
5
HK-2 cell
5
HUES6
5
KBM-7
5
OCI-LY1
5
RS4-11 cell
5
SJSA1
5
U937
5
VCaP cell
5
dermal fibroblast
5
esophageal adenocarcinoma
5
esophageal squamous cell carcinoma
5
fibroblast of cardiac tissue
5
glioblastoma cell
5
melanoma cell
5
osteosarcoma
5
synovial sarcoma cell
5
triple-negative breast cancer
4
A172
4
A673
4
AG08396 cell
4
COLO205
4
GM03348
4
GM04503
4
GM04504
4
GM18505
4
GM19099
4
GM19193
4
H4
4
HAC cell
4
HBMEC cell
4
HS-SY-2 cell
4
HUES64
4
L1-S8
4
L1-S8R
4
LNCAP
4
M059J
4
MDA-MB-231 cell
4
Mantle cell lymphoma
4
NB4
4
NCCIT cell
4
NCI-H226 cell
4
NCI-H460 cell
4
NHEK
4
Normal Human Astrocytes
4
OCI-LY3
4
PANC-1 cell
4
Panc1
4
RPMI7951
4
SAEC
4
SJCRH30
4
SK-MEL-5
4
SK-N-SH_RA
4
T-47D cell
4
Tumor-derived cell line
4
U-266 cell
4
U-87 MG
4
U2OS
4
WI-38 cell
4
cardiac muscle cell
4
esophageal epithelial cell
4
glioma cell
4
iPS DF 19.11
4
immortal neural cell line cell
4
keratinocyte
4
lung fibroblast cell line
4
macrophage
4
metastatic melanoma
4
neural progenitor cell
4
pancreatic cell line
4
smooth muscle cell of the coronary artery
3
786-O cell
3
8988T
3
A-673 cell
3
ACC112
3
AG08395 cell
3
AG20443
3
BJAB cell
3
C4-2B
3
COLO-320 cell
3
COLO829
3
CWRU1
3
D341 Med cell
3
DND-41
3
DND-41 cell
3
DOHH2
3
ECC-1
3
EH
3
EL
3
ELF-1
3
ELR
3
ES-I3
3
G-401 cell
3
GM10847
3
GM12872
3
GM12873
3
GM18526
3
GM18951
3
GM23338
3
H54
3
HEK293-T-REx cell
3
HPDE6-E6E7
3
HS-27A
3
HS-5
3
HT1080
3
HTR-8/Svneo
3
HUES48
3
HeLa cell
3
HuH-7.5
3
KMS-11
3
KOPT-K1
3
Kasumi-1
Organ
3
embryo
Life stage
3
embryonic
Date released
3
September, 2022
Software used
2
r
1
chromhmm
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
NAMALWA cell
organ_slims!
kidney
software_used.software.name!
encode-ccres
Showing 3 of 3 results
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Download
FileSet
DSR440MAB
released
Annotation file set
: Candidate regulatory elements for BSS00715 HUES48 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR145KNK
released
Annotation file set
: Target gene predictions for BSS00715 HUES48 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134GHD
released
Annotation file set
: Chromatin states for BSS00715 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP