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Schema
Citing CMDGA
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Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
4
adipocyte
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
3
temporal lobe
2
CD8-positive, alpha-beta T cell
2
ESC derived cell line
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
angular gyrus
2
conventional dendritic cell
2
endothelial cell
2
islet of Langerhans
2
liver
2
macrophage
2
megakaryocyte
2
memory B cell
2
monocyte
2
muscle of leg
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
natural killer cell mediated cytotoxicity
2
non-classical monocyte
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
2
regulatory T cell
2
stellate neuron
1
CD34-PB
1
GM12878
1
H1-hESC
1
HepG2
1
K562
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
coronary artery
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
fibroblast of lung
germinal matrix
1
keratinocyte
1
kidney
1
layer of hippocampus
1
mammary epithelial cell
1
mid-frontal lobe
1
mucosa of rectum
1
pancreas
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
Organ
1
liver
Date released
7
September, 2022
4
February, 2021
1
August, 2017
1
August, 2021
1
June, 2020
1
March, 2020
1
May, 2021
1
October, 2022
0
January, 2021
0
May, 2019
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
biosample_term_name!
germinal matrix
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Download
FileSet
TSTSR035696
released
Annotation file set
: ChromHMM 13-state model for Hepatocellular Carcinoma Cell Line
Lab:
Stephen Parker, UMich
Project:
AMP