Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
130
monocyte
63
HeLa-S3
61
A549
53
common myeloid progenitor, CD34-positive
49
CD8-positive, alpha-beta T cell
49
H1-hESC
45
islet of Langerhans
43
B cell
43
hematopoietic multipotent progenitor cell
41
endothelial cell
40
K562
40
liver
38
neural progenitor cell
32
CD4-positive, alpha-beta memory T cell
32
fibroblast
32
hepatocyte
31
kidney
31
macrophage
31
stomach
30
adipose tissue
28
adrenal gland
28
regulatory T cell
28
retina
28
spleen
26
heart left ventricle
25
MCF-7
25
tibial nerve
24
pancreatic ductal cell
23
EndoC_BH1
23
T-helper 1 cell
23
body of pancreas
23
epithelial cell of proximal tubule
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
adipocyte
22
caudate nucleus
22
foreskin keratinocyte
22
natural killer cell
22
pericyte cell
22
sigmoid colon
21
T-helper 17 cell
21
glomerular endothelial cell
21
pancreas
21
smooth muscle cell
21
subcutaneous adipose tissue
20
breast cancer cell
20
keratinocyte
20
mononuclear cell
20
pigmented layer of retina
19
coronary artery
19
heart
19
psoas muscle
19
right atrium auricular region
18
HFFc6
18
embryonic stem cell
18
endothelial cell of umbilical vein
18
foreskin fibroblast
18
pancreatic beta cell
18
substantia nigra
18
tibial artery
17
T-helper 2 cell
17
gastrocnemius medialis
17
omental fat pad
17
pancreatic alpha cell
17
thyroid gland
17
transverse colon
16
CD14-positive monocyte
16
HepG2
16
endothelial cell of hepatic sinusoid
16
layer of hippocampus
16
osteoblast
16
pancreatic acinar cell
16
retinal pigment epithelial cell
16
skeletal muscle tissue
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
ascending aorta
15
astrocyte
15
cerebellum
15
fibroblast of lung
15
frontal cortex
15
induced pluripotent stem cell
15
mammary gland epithelial cell
15
neutrophil
15
ovary
15
pancreatic delta cell
15
skeletal muscle myoblast
14
GM12878
14
endocrine pancreas
14
prostate gland
14
putamen
13
Peyer's patch
13
bronchial epithelial cell
13
excitatory neuron
13
fibroblast of cardiac tissue
13
heart right ventricle
13
mesenchymal stem cell
13
skeletal muscle satellite cell
13
small intestine
13
temporal lobe
12
Ammon's horn
12
aorta
12
lung
12
lymphoblastoid cell line
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neuroblastoma cell
11
brain
11
fibroblast of dermis
11
glomerular visceral epithelial cell
11
mammary epithelial cell
11
testis
10
22Rv1
10
Rhabdomyosarcoma
10
breast epithelium
10
choroid plexus epithelial cell
10
epithelial cell of prostate
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
hepatic stellate cell
10
kidney tubule cell
10
lymphocyte
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
thoracic aorta
9
SK-N-DZ
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
erythroblast
9
esophagus
9
liposarcoma
9
parathyroid adenoma
9
vagina
8
B-lymphoblastoid cell line
8
GM12865
8
NAMALWA cell
8
cardiac muscle cell
8
cingulate gyrus
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
duodenal mucosa
fibroblast cell line
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
lower leg skin
8
myoepithelial cell of mammary gland
8
naive T cell
8
skeletal muscle fiber
8
thymus
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CMK
7
Caco-2 cell
7
GM06990
7
GM12864
7
HT-29
7
SK-N-MC
7
SK-N-SH
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
kidney glomerular epithelial cell
7
mature neutrophil
7
memory B cell
7
renal cortical epithelial cell
7
right lobe of liver
7
stomach smooth muscle
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
HUES8
6
SJSA1
6
SW480
6
WI38
6
anterior cingulate cortex
6
chondrocyte
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
midbrain
6
middle frontal gyrus
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
neuronal stem cell
Organ
4
lung
Life stage
embryonic
Date released
2
February, 2021
1
June, 2020
1
October, 2022
Software used
3
macs
1
chromhmm
Lab
4
AMP-T2D consortium
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
biosample_term_name!
fibroblast cell line
lab.title!
Jesse Engreitz, Stanford University
relevant_life_stage!
embryonic
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR195QHJ
released
Annotation file set
: Binding sites annotation for IMR-90 (IMR90) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR843YYZ
released
Annotation file set
: Histone modifications annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR268PHG
released
Annotation file set
: Binding sites annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR879CGQ
released
Annotation file set
: Accessible chromatin annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP