Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
histone modifications
Annotation Category
6
cis-regulatory elements
2
Target gene links
Annotation type Category
6
ChIP-seq
5
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
8
bed bed3+
1
bed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
8
cell line
Biosample term
50
lung
44
A549
39
left lung
34
right lung
32
liver
23
hepatocyte
16
HepG2
13
fibroblast of lung
13
upper lobe of left lung
12
endothelial cell of hepatic sinusoid
9
hepatic stellate cell
8
IMR-90
7
PC-9
7
type II pneumocyte
6
WI38
5
HuH-7
4
lung microvascular endothelial cell
4
type I pneumocyte
3
NCI-H226 cell
3
NCI-H460 cell
3
right lobe of liver
2
HuH-7.5
1
Liver fetal (hepatocyte)
1
NCI-H226
1
NCI-H460
1
endothelial cell of artery
1
lung neuroendocrine cell
Organ
8
lung
0
liver
Life stage
3
embryonic
Date released
3
February, 2021
2
September, 2022
1
June, 2020
1
May, 2021
1
October, 2022
Software used
3
macs
2
r
1
abc
1
chromhmm
1
encode-ccres
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
Showing 8 of 8 results
table-tab-icon
matrix-icon
Download
FileSet
DSR195QHJ
released
Annotation file set
: Binding sites annotation for IMR-90 (IMR90) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR446ATU
released
Annotation file set
: Candidate regulatory elements for BSS00720 IMR-90 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772ORX
released
Annotation file set
: Target gene predictions for BSS00720 IMR-90 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR249FPB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE IMR-90
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR843YYZ
released
Annotation file set
: Histone modifications annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR268PHG
released
Annotation file set
: Binding sites annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895REE
released
Annotation file set
: enhancer-gene predicton of IMR90-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR879CGQ
released
Annotation file set
: Accessible chromatin annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP