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Clear Filters
Annotation type
  • 4target gene predictions
  • 1accessible chromatin
  • 1binding sites
  • 1candidate regulatory elements
  • 1histone modifications
Annotation Category
  • 4Target gene links
  • 4cis-regulatory elements
Annotation type Category
  • 6DNase-seq
  • 3ChIP-seq
Available data
  • 8bed bed3+
File set status
  • 8released
Genome assembly (visualization)
  • 4GRCh38
  • 4hg19
Organism
  • 8Homo sapiens
Biosample type
  • 5cell line
  • 3primary cell
Biosample term
  • 68HeLa-S3
  • 11uterus
  • 8Ishikawa
  • 2endometrium cancer
  • 2uterine smooth muscle cell
  • 1cervix - ectocervix
  • 1endometrium
Organ
  • 8uterus
Life stage
  • 1adult
Date released
  • 4July, 2026
  • 3February, 2021
  • 1June, 2020
Software used
  • 3macs
  • 1encode-ccres
Lab
  • 8AMP-T2D consortium
Project
  • 8AMP
Collection Tags
  • 4ENCODE-rE2G
  • 3ChIP-Atlas
  • 1ENCODE
RFA
  • 8AMP

Showing 8 of 8 results

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  • FileSet

    DSR845051

    released

    Annotation file set: Target gene predictions for Ishikawa (EFO:0005718) derived from ENCODE-rE2G (ENCSR514CUR).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR137145

    released

    Annotation file set: Target gene predictions for Ishikawa (EFO:0005718) derived from ENCODE-rE2G (ENCSR672IBP).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR214031

    released

    Annotation file set: Target gene predictions for Ishikawa (EFO:0005718) derived from ENCODE-rE2G (ENCSR596UBK).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR304906

    released

    Annotation file set: Target gene predictions for Ishikawa (EFO:0005718) derived from ENCODE-rE2G (ENCSR653LQZ).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR256RVP

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Ishikawa
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR822EYN

    released

    Annotation file set: Histone modifications annotation for Uterus Ishikawa from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR551XXL

    released

    Annotation file set: Binding sites annotation for Uterus Ishikawa from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR250RSS

    released

    Annotation file set: Accessible chromatin annotation for Uterus Ishikawa from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
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