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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
105
monocyte
40
CD8-positive, alpha-beta T cell
31
neural progenitor cell
28
kidney
28
retina
25
heart
25
stomach
20
breast cancer cell
20
pigmented layer of retina
19
brain
18
endothelial cell
18
fibroblast
18
muscle of arm
17
lung
16
placenta
15
adrenal gland
15
large intestine
15
muscle of back
15
muscle of leg
15
small intestine
14
common myeloid progenitor, CD34-positive
14
hepatocyte
14
macrophage
13
B cell
13
left lung
13
liver
12
excitatory neuron
12
hematopoietic multipotent progenitor cell
12
neuroblastoma cell
12
renal pelvis
12
retinal pigment epithelial cell
12
right lung
11
embryonic stem cell
11
endothelial cell of hepatic sinusoid
11
renal cortex interstitium
11
thymus
10
EndoC_BH1
10
Rhabdomyosarcoma
10
adipocyte
10
cardiac muscle cell
10
gastric cancer cell
10
mammary epithelial cell
10
pancreas
10
pancreatic ductal cell
10
spinal cord
10
spleen
9
CD4-positive, alpha-beta T cell
9
HepG2
9
MCF-7
9
astrocyte
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
neuronal stem cell
9
smooth muscle cell
8
foreskin fibroblast
8
foreskin keratinocyte
8
heart left ventricle
8
keratinocyte
8
pancreatic beta cell
8
pericyte cell
8
right kidney
7
B-lymphoblastoid cell line
7
T cell
7
T-cell acute lymphoblastic leukemia
7
acute myeloid leukemia
7
bronchial epithelial cell
7
chondrocyte
7
esophageal adenocarcinoma
7
fibroblast cell line
7
osteoblast
7
pancreatic acinar cell
6
A549
6
Chondroid Chordoma
6
H9
6
Rh-4 cell
6
SGBS preadipocytes
6
endothelial cell of umbilical vein
6
hESC cell
6
left kidney
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neuroblastoma cell line
6
testis
6
upper lobe of left lung
5
CD4-positive, alpha-beta memory T cell
5
Ewing sarcoma
5
HEK293
5
Jurkat
5
LNCAP
5
Peyer's patch
5
RS4-11 cell
5
Th1 cell
5
caudate nucleus
5
fibroblast of cardiac tissue
5
hepatic stellate cell
5
islet of Langerhans
5
lymphoblastoid cell line
5
mesenchymal stem cell
5
natural killer cell
5
osteosarcoma
5
prostate cancer cell line
5
regulatory T cell
5
sigmoid colon
5
skeletal muscle satellite cell
5
tibial nerve
4
22Rv1
4
B-lymphocyte
4
CD14-positive monocyte
4
CD1c-positive myeloid dendritic cell
4
CMK
4
COLO205
4
GM06990
GM12864
4
GM12865
4
GM12878
4
GM23248
4
HAP-1
4
HL-60
4
HS-SY-2 cell
4
HT-29
4
IMR-90
4
Ishikawa
4
K562
4
LHCN-M2
4
MG63
4
MM.1S
4
Mantle cell lymphoma
4
OCI-LY7
4
PC-3
4
PC-9
4
RKO
4
RPMI8226
4
RWPE1
4
SK-N-DZ
4
SK-N-MC
4
SW480
4
T-cell
4
T-helper 1 cell
4
WERI-Rb-1
4
WI38
4
acute myeloid leukemia cell
4
adipose tissue
4
adipose-derived stem cell
4
aortic endothelial cell
4
breast epithelium
4
choroid plexus epithelial cell
4
colon adenocarcinoma
4
dermal fibroblast
4
diffuse large B-cell lymphoma
4
erythroblast
4
erythroid cell
4
esophageal squamous cell carcinoma
4
esophagus squamous epithelium
4
foreskin melanocyte
4
left renal pelvis
4
pancreatic alpha cell
4
pancreatic delta cell
4
right renal pelvis
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
trophoblast cell
3
cardiac fibroblast
3
786-O cell
3
A-673 cell
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
Ammon's horn
3
BE(2)-C
3
BJ cell
3
COLO-320 cell
3
Caco-2 cell
3
D341 Med cell
3
Daoy
3
G-401 cell
3
GM10248
3
GM10266
3
GM12873
3
GM12875
3
GM13976
3
GM13977
3
GM19240
3
GM20000
3
H1-hESC
3
HAC cell
3
HBMEC cell
3
HCT-116 cell
3
HUES6
3
HeLa cell
3
HuH-7
3
KARPAS-422 cell
3
KBM-7
3
Kasumi-1
3
LoVo cell
3
MCF 10A
3
MDA-MB-231 cell
3
MOLM-13 cell
Organ
4
blood
4
bodily fluid
Life stage
1
adult
Date released
3
February, 2021
1
June, 2020
Software used
12
r
8
chromhmm
3
macs
1
abc
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
GM12864
Showing 4 of 4 results
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Download
FileSet
DSR396CCK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE K562
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855GPE
released
Annotation file set
: Histone modifications annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR044RQC
released
Annotation file set
: Binding sites annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP