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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
60
placenta
23
trophoblast cell
22
foreskin keratinocyte
21
keratinocyte
19
foreskin fibroblast
16
chorionic villus
12
fibroblast of dermis
12
skin fibroblast
10
chorion membrane
10
dermis blood vessel endothelial cell
10
lower leg skin
8
dermis lymphatic vessel endothelial cell
8
fibroblast of villous mesenchyme
7
GM23248
7
MG63
6
OCI-LY1
6
SJSA1
6
iPS DF 4.7 Cell Line
6
skin of body
6
umbilical cord
5
L1-S8
5
OCI-LY3
5
RPMI7951
5
SK-MEL-5
5
iPS DF 19.11
4
HS-27A
4
HS-5
4
KMS-11
4
L1-S8R
4
NCI-H929
4
U2OS
4
amnion
4
bone tissue
4
dermis microvascular lymphatic vessel endothelial cell
4
femur
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
4
megakaryocyte
4
stromal cell of bone marrow
3
COLO829
3
HTR-8/Svneo
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
arm bone
3
epidermal melanocyte
3
epithelial cell of amnion
3
leg bone
3
mononuclear cell of bone marrow
3
suprapubic skin
2
basal cell of epidermis
2
chorion
2
granular cell of epidermis
2
skin of forearm
2
skin of prepuce of penis
1
BJ
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
HGPS cell
1
amniotic epithelial cell
1
bone cell
1
bone marrow cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 4.7
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
trophoblast giant cell
Organ
4
bone element
0
extraembryonic component
0
skin of body
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR470UTA
released
Annotation file set
: Candidate regulatory elements for BSS01104 KMS-11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR096IKE
released
Annotation file set
: Target gene predictions for BSS01104 KMS-11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR378MQW
released
Annotation file set
: Chromatin states for BSS01104 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR225JER
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE KMS-11
Lab:
AMP-T2D consortium
Project:
AMP