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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
56
placenta
21
trophoblast cell
16
chorionic villus
9
chorion membrane
5
fibroblast of villous mesenchyme
4
HS-27A
4
HS-5
4
KMS-11
4
L1-S8
4
MG63
4
NCI-H929
4
OCI-LY1
4
OCI-LY3
4
SJSA1
4
amnion
4
bone tissue
4
femur
4
stromal cell of bone marrow
4
umbilical cord
3
HTR-8/Svneo
3
L1-S8R
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
arm bone
3
epithelial cell of amnion
3
leg bone
2
chorion
2
megakaryocyte
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
U2OS
1
amniotic epithelial cell
Organ
4
bone element
0
extraembryonic component
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
mouth
software_used.software.name!
macs
Showing 4 of 4 results
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Download
FileSet
DSR787XSO
released
Annotation file set
: Candidate regulatory elements for BSS01107 L1-S8 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR160KKH
released
Annotation file set
: Target gene predictions for BSS01107 L1-S8 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR960WNO
released
Annotation file set
: Chromatin states for BSS01107 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR293YZV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE L1-S8
Lab:
AMP-T2D consortium
Project:
AMP