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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
5
bed bed3+
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
130
monocyte
69
heart
65
kidney
65
stomach
60
HeLa-S3
55
brain
52
H1-hESC
52
lung
51
muscle of arm
49
CD8-positive, alpha-beta T cell
47
neural progenitor cell
47
small intestine
46
adrenal gland
45
islet of Langerhans
45
placenta
44
endothelial cell
43
A549
42
large intestine
42
muscle of leg
41
liver
41
muscle of back
40
common myeloid progenitor, CD34-positive
39
left lung
38
B cell
37
retina
36
thymus
35
fibroblast
35
hepatocyte
34
K562
34
macrophage
34
right lung
33
hematopoietic multipotent progenitor cell
32
right kidney
31
renal cortex interstitium
31
renal pelvis
27
left kidney
27
spinal cord
26
heart left ventricle
26
smooth muscle cell
26
spleen
25
regulatory T cell
24
adipose tissue
24
pancreatic ductal cell
23
CD4-positive, alpha-beta memory T cell
23
EndoC_BH1
23
adipocyte
23
pericyte cell
22
epithelial cell of proximal tubule
22
natural killer cell
21
subcutaneous adipose tissue
21
tibial nerve
20
MCF-7
20
breast cancer cell
20
glomerular endothelial cell
20
pigmented layer of retina
19
T-helper 1 cell
19
body of pancreas
caudate nucleus
18
HFFc6
18
T cell
18
T-helper 17 cell
18
foreskin keratinocyte
18
keratinocyte
18
pancreas
18
pancreatic beta cell
17
pancreatic alpha cell
17
right atrium auricular region
16
coronary artery
16
endothelial cell of hepatic sinusoid
16
foreskin fibroblast
16
ovary
16
pancreatic acinar cell
16
sigmoid colon
16
substantia nigra
16
trophoblast cell
15
CD4-positive, alpha-beta T cell
15
CD8-positive, alpha-beta memory T cell
15
HepG2
15
astrocyte
15
cardiac muscle cell
15
induced pluripotent stem cell
15
omental fat pad
15
osteoblast
15
pancreatic delta cell
15
retinal pigment epithelial cell
14
endothelial cell of umbilical vein
14
mesenchymal stem cell
14
mononuclear cell
14
psoas muscle
14
testis
14
tibial artery
14
transverse colon
13
T-helper 2 cell
13
excitatory neuron
13
fibroblast of cardiac tissue
13
frontal cortex
13
gastrocnemius medialis
13
heart right ventricle
13
layer of hippocampus
13
neutrophil
13
putamen
13
skeletal muscle tissue
13
thyroid gland
13
upper lobe of left lung
12
CD14-positive monocyte
12
GM12878
12
H9
12
ascending aorta
12
cerebellum
12
embryonic stem cell
12
lymphoblastoid cell line
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neuroblastoma cell
12
prostate gland
12
skeletal muscle myoblast
11
Ammon's horn
11
chorionic villus
11
fibroblast of lung
11
mammary epithelial cell
11
mammary gland epithelial cell
11
muscle of trunk
11
neuronal stem cell
10
Peyer's patch
10
Rhabdomyosarcoma
10
bronchial epithelial cell
10
endocrine pancreas
10
gastric cancer cell
10
glomerular visceral epithelial cell
10
left renal cortex interstitium
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
right renal pelvis
10
skeletal muscle satellite cell
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
erythroblast
9
hepatic stellate cell
9
left cardiac atrium
9
left renal pelvis
9
liposarcoma
9
lymphocyte
9
neurosphere
9
skin fibroblast
8
22Rv1
8
B-lymphoblastoid cell line
8
aorta
8
choroid plexus epithelial cell
8
epithelial cell of prostate
8
esophagus
8
fibroblast cell line
8
fibroblast of dermis
8
mast cell
8
skeletal muscle fiber
8
temporal lobe
8
trophoblast
7
GM12865
7
HEK293
7
amygdala
7
breast epithelium
7
cardiomyocytes (cardiac muscle cell)
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
kidney tubule cell
7
lower leg skin
7
mature neutrophil
7
memory B cell
7
thoracic aorta
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Chondroid Chordoma
6
GM06990
6
HT-29
6
HUES8
6
NAMALWA cell
6
SK-N-MC
6
anterior cingulate cortex
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
cingulate gyrus
6
colon epithelial cell
6
endometrium adenocarcinoma
6
eye
6
fibroblast of pulmonary artery
6
globus pallidus
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
immortal human breast epithelial cell line cell
6
mesendoderm
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
nucleus accumbens
Disease term
2
colorectal adenocarcinoma
Life stage
2
adult
Date released
2
February, 2021
2
September, 2022
1
June, 2020
Software used
3
macs
2
r
Lab
5
AMP-T2D consortium
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
biosample_term_name!
caudate nucleus
files.file_type!
bed bed9
lab.title!
Jesse Engreitz, Stanford University
Showing 5 of 5 results
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Download
FileSet
DSR644QXR
released
Annotation file set
: Candidate regulatory elements for BSS01179 LoVo cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR500ZCJ
released
Annotation file set
: Target gene predictions for BSS01179 LoVo cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR853MOE
released
Annotation file set
: Histone modifications annotation for Digestive tract LoVo from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR932SFE
released
Annotation file set
: Binding sites annotation for Digestive tract LoVo from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR741ZMU
released
Annotation file set
: Accessible chromatin annotation for Digestive tract LoVo from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP