Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
Clear Filters
Annotation type
  • 3candidate regulatory elements
  • 3target gene predictions
Annotation Category
  • 3Target gene links
  • 3cis-regulatory elements
Annotation type Category
  • 6DNase-seq
  • 3ChIP-seq
Available data
  • 6bed bed3+
File set status
  • 6released
Genome assembly (visualization)
  • 3GRCh38
  • 3hg19
Organism
  • 6Homo sapiens
Biosample type
  • 6cell line
Biosample term
  • 33MCF-7
  • 16mammary gland epithelial cell
  • 13mammary epithelial cell
  • 10T47D
  • 9fibroblast of mammary gland
  • 8myoepithelial cell of mammary gland
  • 7luminal epithelial cell of mammary gland
  • 6MCF 10A
  • 2mammary gland
Organ
  • 6mammary gland
Life stage
  • 3adult
Date released
  • 3February, 2021
  • 3July, 2026
Software used
  • 3encode-ccres
Lab
  • 6AMP-T2D consortium
Project
  • 6AMP
Collection Tags
  • 3ENCODE
  • 3ENCODE-rE2G
RFA
  • 6AMP

Showing 6 of 6 results

table-tab-iconmatrix-icon

  • FileSet

    DSR466034

    released

    Annotation file set: Target gene predictions for MCF 10A (EFO:0001200) derived from ENCODE-rE2G (ENCSR327UFM).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR661967

    released

    Annotation file set: Target gene predictions for MCF 10A (EFO:0001200) derived from ENCODE-rE2G (ENCSR600SNZ).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR710420

    released

    Annotation file set: Target gene predictions for MCF 10A (EFO:0001200) derived from ENCODE-rE2G (ENCSR660RCL).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR641CYG

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MCF 10A
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR261OKT

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MCF 10A
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR456VHQ

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MCF 10A
    Lab: AMP-T2D consortium
    Project: AMP
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego